Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 LINC02015-202ENST00000436078 2957 ntTSL 2 BASIC14.31□□□□□ -0.12
CCDC50Q8IVM0 ACTBP11-201ENST00000436287 1126 ntBASIC14.31□□□□□ -0.12
CCDC50Q8IVM0 AC073150.1-201ENST00000450406 1084 ntBASIC14.31□□□□□ -0.12
CCDC50Q8IVM0 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC14.31□□□□□ -0.12
CCDC50Q8IVM0 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC14.31□□□□□ -0.12
CCDC50Q8IVM0 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC50Q8IVM0 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
CCDC50Q8IVM0 AC008723.1-201ENST00000506922 207 ntBASIC14.31□□□□□ -0.12
CCDC50Q8IVM0 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC14.31□□□□□ -0.12
CCDC50Q8IVM0 AC114947.1-202ENST00000514136 344 ntBASIC14.31□□□□□ -0.12
CCDC50Q8IVM0 ZFAT-209ENST00000520727 4686 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC50Q8IVM0 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC14.31□□□□□ -0.12
CCDC50Q8IVM0 PHBP15-201ENST00000574228 665 ntBASIC14.31□□□□□ -0.12
CCDC50Q8IVM0 NAT9-211ENST00000580632 799 ntTSL 3 BASIC14.31□□□□□ -0.12
CCDC50Q8IVM0 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC14.31□□□□□ -0.12
CCDC50Q8IVM0 PRICKLE1-216ENST00000640132 4278 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CCDC50Q8IVM0 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC14.31□□□□□ -0.12
CCDC50Q8IVM0 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC14.31□□□□□ -0.12
CCDC50Q8IVM0 TRIM3-203ENST00000525074 3044 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CCDC50Q8IVM0 ZNF185-205ENST00000370270 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC50Q8IVM0 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC50Q8IVM0 PIGG-205ENST00000503111 2629 ntTSL 2 BASIC14.31□□□□□ -0.12
CCDC50Q8IVM0 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC50Q8IVM0 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC14.31□□□□□ -0.12
CCDC50Q8IVM0 ZWILCH-203ENST00000535141 2206 ntTSL 2 BASIC14.31□□□□□ -0.12
CCDC50Q8IVM0 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC50Q8IVM0 AC008132.1-202ENST00000342005 1389 ntBASIC14.31□□□□□ -0.12
CCDC50Q8IVM0 EPB41L5-205ENST00000452780 6410 ntTSL 5 BASIC14.31□□□□□ -0.12
CCDC50Q8IVM0 ADAMTSL4-202ENST00000369038 4167 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC50Q8IVM0 PTCD1-201ENST00000292478 5582 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC50Q8IVM0 ALDH1A2-204ENST00000537372 3700 ntTSL 2 BASIC14.31□□□□□ -0.12
CCDC50Q8IVM0 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC14.31□□□□□ -0.12
CCDC50Q8IVM0 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC14.31□□□□□ -0.12
CCDC50Q8IVM0 CASS4-202ENST00000434344 2888 ntTSL 2 BASIC14.31□□□□□ -0.12
CCDC50Q8IVM0 ZNF197-204ENST00000383745 2935 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC50Q8IVM0 SLX4-201ENST00000294008 7307 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CCDC50Q8IVM0 DNMT1-201ENST00000340748 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC50Q8IVM0 CUL4A-203ENST00000375441 4037 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC50Q8IVM0 ZFAND3-203ENST00000373391 3001 ntTSL 5 BASIC14.31□□□□□ -0.12
CCDC50Q8IVM0 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC50Q8IVM0 TACC2-209ENST00000369004 3667 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC50Q8IVM0 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC50Q8IVM0 SECISBP2-201ENST00000339901 3320 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC50Q8IVM0 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CCDC50Q8IVM0 CHD3-203ENST00000380358 7356 ntTSL 2 BASIC14.3□□□□□ -0.12
CCDC50Q8IVM0 ZNF740-201ENST00000416904 8578 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC50Q8IVM0 NOP2-212ENST00000541778 3038 ntTSL 2 BASIC14.3□□□□□ -0.12
CCDC50Q8IVM0 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC14.3□□□□□ -0.12
CCDC50Q8IVM0 NAA60-214ENST00000572584 2450 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC50Q8IVM0 PAX8-202ENST00000263335 3735 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC50Q8IVM0 SDCCAG3P2-201ENST00000326105 1023 ntBASIC14.3□□□□□ -0.12
CCDC50Q8IVM0 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
CCDC50Q8IVM0 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC50Q8IVM0 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CCDC50Q8IVM0 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC50Q8IVM0 AL627231.1-201ENST00000394467 1125 ntBASIC14.3□□□□□ -0.12
CCDC50Q8IVM0 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC50Q8IVM0 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC14.3□□□□□ -0.12
CCDC50Q8IVM0 AL008707.1-201ENST00000422498 534 ntBASIC14.3□□□□□ -0.12
CCDC50Q8IVM0 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC50Q8IVM0 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC14.3□□□□□ -0.12
CCDC50Q8IVM0 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC14.3□□□□□ -0.12
CCDC50Q8IVM0 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC50Q8IVM0 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC14.3□□□□□ -0.12
CCDC50Q8IVM0 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
CCDC50Q8IVM0 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC14.3□□□□□ -0.12
CCDC50Q8IVM0 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC50Q8IVM0 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC14.3□□□□□ -0.12
CCDC50Q8IVM0 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
CCDC50Q8IVM0 HPX-213ENST00000615166 826 ntTSL 5 BASIC14.3□□□□□ -0.12
CCDC50Q8IVM0 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC14.3□□□□□ -0.12
CCDC50Q8IVM0 SLC5A11-211ENST00000569071 1919 ntTSL 5 BASIC14.3□□□□□ -0.12
CCDC50Q8IVM0 FAM155A-201ENST00000375915 8503 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC50Q8IVM0 TGM3-201ENST00000381458 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC50Q8IVM0 H1FX-AS1-201ENST00000383461 2600 ntTSL 2 BASIC14.3□□□□□ -0.12
CCDC50Q8IVM0 DYSF-208ENST00000410020 6657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC50Q8IVM0 LIN28A-202ENST00000326279 4008 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC50Q8IVM0 TMEM120B-204ENST00000449592 7461 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC50Q8IVM0 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC50Q8IVM0 IST1-203ENST00000378799 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC50Q8IVM0 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC50Q8IVM0 ARID4A-206ENST00000431317 5783 ntTSL 5 BASIC14.3□□□□□ -0.12
CCDC50Q8IVM0 BCL2L11-217ENST00000610735 5120 ntTSL 5 BASIC14.3□□□□□ -0.12
CCDC50Q8IVM0 MAP2-201ENST00000199940 2241 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC50Q8IVM0 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC50Q8IVM0 HCN3-201ENST00000368358 3718 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC50Q8IVM0 CDC42-202ENST00000344548 2256 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC50Q8IVM0 DRD3-201ENST00000295881 1541 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CCDC50Q8IVM0 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CCDC50Q8IVM0 POC1B-GALNT4-202ENST00000548729 5436 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CCDC50Q8IVM0 EGFLAM-204ENST00000397202 2398 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC50Q8IVM0 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC50Q8IVM0 GYG2-204ENST00000381163 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC50Q8IVM0 PITPNM3-202ENST00000421306 6945 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CCDC50Q8IVM0 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC14.29□□□□□ -0.12
CCDC50Q8IVM0 USP33-203ENST00000370793 4502 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC50Q8IVM0 DOT1L-201ENST00000398665 7436 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC50Q8IVM0 LINC01993-201ENST00000374945 2934 ntTSL 2 BASIC14.29□□□□□ -0.12
CCDC50Q8IVM0 ADAMTSL1-205ENST00000380548 8030 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CCDC50Q8IVM0 TNK1-201ENST00000570896 3122 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms