Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CLDN20P56880 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CLDN20P56880 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC12.41□□□□□ -0.42
CLDN20P56880 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CLDN20P56880 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC12.41□□□□□ -0.42
CLDN20P56880 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CLDN20P56880 INPP5J-201ENST00000331075 3347 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
CLDN20P56880 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
CLDN20P56880 C12orf76-205ENST00000548191 2204 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
CLDN20P56880 KCNJ11-201ENST00000339994 2801 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
CLDN20P56880 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CLDN20P56880 CAPN1-202ENST00000524773 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CLDN20P56880 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
CLDN20P56880 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
CLDN20P56880 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CLDN20P56880 NDUFAF7-201ENST00000002125 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CLDN20P56880 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CLDN20P56880 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CLDN20P56880 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC12.41□□□□□ -0.42
CLDN20P56880 ARHGEF1-203ENST00000354532 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CLDN20P56880 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CLDN20P56880 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CLDN20P56880 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC12.41□□□□□ -0.42
CLDN20P56880 HERC3-203ENST00000407637 2634 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CLDN20P56880 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
CLDN20P56880 LYPLA2P1-203ENST00000447689 696 ntBASIC12.41□□□□□ -0.42
CLDN20P56880 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CLDN20P56880 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
CLDN20P56880 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC12.41□□□□□ -0.42
CLDN20P56880 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC12.41□□□□□ -0.42
CLDN20P56880 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC12.41□□□□□ -0.42
CLDN20P56880 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC12.41□□□□□ -0.42
CLDN20P56880 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
CLDN20P56880 DPP9-214ENST00000598800 3098 ntTSL 5 BASIC12.41□□□□□ -0.42
CLDN20P56880 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CLDN20P56880 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
CLDN20P56880 AP003419.4-201ENST00000616071 517 ntBASIC12.41□□□□□ -0.42
CLDN20P56880 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
CLDN20P56880 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
CLDN20P56880 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CLDN20P56880 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CLDN20P56880 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CLDN20P56880 BSCL2-206ENST00000405837 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CLDN20P56880 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC12.41□□□□□ -0.42
CLDN20P56880 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CLDN20P56880 DNMT3B-205ENST00000443239 2674 ntTSL 2 BASIC12.41□□□□□ -0.42
CLDN20P56880 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC12.41□□□□□ -0.42
CLDN20P56880 RAB37-203ENST00000392612 2528 ntTSL 2 BASIC12.41□□□□□ -0.42
CLDN20P56880 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
CLDN20P56880 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CLDN20P56880 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CLDN20P56880 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CLDN20P56880 GRIPAP1-207ENST00000593475 2908 ntTSL 5 BASIC12.41□□□□□ -0.42
CLDN20P56880 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CLDN20P56880 LINC00343-203ENST00000454555 1765 ntTSL 2 BASIC12.41□□□□□ -0.42
CLDN20P56880 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
CLDN20P56880 HOXB13-201ENST00000290295 3467 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CLDN20P56880 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CLDN20P56880 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CLDN20P56880 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CLDN20P56880 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
CLDN20P56880 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC12.4□□□□□ -0.42
CLDN20P56880 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC12.4□□□□□ -0.42
CLDN20P56880 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
CLDN20P56880 AC092978.1-202ENST00000637590 1327 ntBASIC12.4□□□□□ -0.42
CLDN20P56880 TNK1-201ENST00000570896 3122 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
CLDN20P56880 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CLDN20P56880 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC12.4□□□□□ -0.42
CLDN20P56880 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CLDN20P56880 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CLDN20P56880 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC12.4□□□□□ -0.42
CLDN20P56880 AC020917.4-201ENST00000623994 1999 ntBASIC12.4□□□□□ -0.42
CLDN20P56880 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CLDN20P56880 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CLDN20P56880 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CLDN20P56880 FAM53B-203ENST00000392754 3557 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
CLDN20P56880 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CLDN20P56880 OR7E115P-201ENST00000382617 1024 ntBASIC12.4□□□□□ -0.42
CLDN20P56880 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC12.4□□□□□ -0.42
CLDN20P56880 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CLDN20P56880 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC12.4□□□□□ -0.42
CLDN20P56880 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC12.4□□□□□ -0.42
CLDN20P56880 AC073210.1-201ENST00000414799 232 ntBASIC12.4□□□□□ -0.42
CLDN20P56880 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC12.4□□□□□ -0.42
CLDN20P56880 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC12.4□□□□□ -0.42
CLDN20P56880 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC12.4□□□□□ -0.42
CLDN20P56880 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CLDN20P56880 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC12.4□□□□□ -0.42
CLDN20P56880 AC226150.1-201ENST00000544259 466 ntBASIC12.4□□□□□ -0.42
CLDN20P56880 AL356740.1-201ENST00000602192 1297 ntBASIC12.4□□□□□ -0.42
CLDN20P56880 U62317.3-201ENST00000608319 855 ntBASIC12.4□□□□□ -0.42
CLDN20P56880 AC105137.3-201ENST00000617588 984 ntBASIC12.4□□□□□ -0.42
CLDN20P56880 AC002044.2-201ENST00000624910 970 ntBASIC12.4□□□□□ -0.42
CLDN20P56880 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
CLDN20P56880 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CLDN20P56880 ARAF-203ENST00000377045 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
CLDN20P56880 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CLDN20P56880 PLIN3-201ENST00000221957 2333 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
CLDN20P56880 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC12.4□□□□□ -0.42
CLDN20P56880 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms