Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 HERC6-202ENST00000273960 3473 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CLK1P49759 LINC01756-201ENST00000417651 2148 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CLK1P49759 FERMT2-202ENST00000343279 3247 ntTSL 5 BASIC12.79□□□□□ -0.36
CLK1P49759 RAB37-203ENST00000392612 2528 ntTSL 2 BASIC12.79□□□□□ -0.36
CLK1P49759 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
CLK1P49759 PERM1-202ENST00000433179 3340 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
CLK1P49759 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLK1P49759 STX16-202ENST00000355957 4897 ntTSL 2 BASIC12.78□□□□□ -0.36
CLK1P49759 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC12.78□□□□□ -0.36
CLK1P49759 AL139158.3-201ENST00000641212 1562 ntBASIC12.78□□□□□ -0.36
CLK1P49759 EXOC8-201ENST00000366645 5100 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
CLK1P49759 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLK1P49759 PID1-204ENST00000409462 2387 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CLK1P49759 PHF21B-203ENST00000403565 3586 ntTSL 2 BASIC12.78□□□□□ -0.36
CLK1P49759 CHST15-201ENST00000346248 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLK1P49759 ACTN1-202ENST00000376839 2824 ntTSL 2 BASIC12.78□□□□□ -0.36
CLK1P49759 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CLK1P49759 KDM2A-210ENST00000529006 6967 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLK1P49759 LOXL3-204ENST00000409549 2897 ntTSL 2 BASIC12.78□□□□□ -0.36
CLK1P49759 CARD14-209ENST00000573882 4537 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
CLK1P49759 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CLK1P49759 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLK1P49759 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLK1P49759 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
CLK1P49759 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLK1P49759 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC12.78□□□□□ -0.36
CLK1P49759 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC12.78□□□□□ -0.36
CLK1P49759 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CLK1P49759 AL353637.1-201ENST00000451571 732 ntBASIC12.78□□□□□ -0.36
CLK1P49759 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CLK1P49759 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC12.78□□□□□ -0.36
CLK1P49759 AC116345.2-201ENST00000512837 523 ntBASIC12.78□□□□□ -0.36
CLK1P49759 SDHD-202ENST00000525291 790 ntTSL 3 BASIC12.78□□□□□ -0.36
CLK1P49759 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC12.78□□□□□ -0.36
CLK1P49759 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC12.78□□□□□ -0.36
CLK1P49759 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
CLK1P49759 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC12.78□□□□□ -0.36
CLK1P49759 AC244093.1-201ENST00000610837 814 ntBASIC12.78□□□□□ -0.36
CLK1P49759 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC12.78□□□□□ -0.36
CLK1P49759 MIR6769A-201ENST00000617340 73 ntBASIC12.78□□□□□ -0.36
CLK1P49759 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC12.78□□□□□ -0.36
CLK1P49759 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLK1P49759 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CLK1P49759 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLK1P49759 PAX9-202ENST00000402703 3104 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
CLK1P49759 VASH2-203ENST00000366965 3572 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLK1P49759 ABL2-207ENST00000507173 3177 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLK1P49759 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CLK1P49759 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CLK1P49759 PLIN3-201ENST00000221957 2333 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLK1P49759 CST3-203ENST00000398411 3286 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLK1P49759 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC12.78□□□□□ -0.36
CLK1P49759 COX18-201ENST00000295890 6846 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLK1P49759 AL357140.3-201ENST00000639753 1983 ntBASIC12.78□□□□□ -0.36
CLK1P49759 SRRT-215ENST00000614484 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLK1P49759 CPN2-201ENST00000323830 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLK1P49759 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
CLK1P49759 SLC26A6-205ENST00000395550 2589 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
CLK1P49759 AC009123.1-202ENST00000565643 2551 ntTSL 2 BASIC12.77□□□□□ -0.36
CLK1P49759 NAV1-203ENST00000367302 9685 ntTSL 5 BASIC12.77□□□□□ -0.36
CLK1P49759 SGSM1-201ENST00000400358 6643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
CLK1P49759 PFKFB3-203ENST00000379775 4483 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CLK1P49759 KCNH1-205ENST00000638498 3479 ntTSL 5 BASIC12.77□□□□□ -0.36
CLK1P49759 TMEM136-202ENST00000375095 4143 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
CLK1P49759 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CLK1P49759 CEP68-201ENST00000260569 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
CLK1P49759 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC12.77□□□□□ -0.36
CLK1P49759 INTS3-204ENST00000435409 3597 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
CLK1P49759 SEMA6A-202ENST00000343348 6878 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CLK1P49759 DLGAP2-201ENST00000421627 3165 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
CLK1P49759 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CLK1P49759 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CLK1P49759 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CLK1P49759 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CLK1P49759 ELK2AP-201ENST00000392510 1007 ntBASIC12.77□□□□□ -0.37
CLK1P49759 BANF1P3-201ENST00000412556 261 ntBASIC12.77□□□□□ -0.37
CLK1P49759 CYP46A4P-201ENST00000414953 267 ntBASIC12.77□□□□□ -0.37
CLK1P49759 ISCA2P1-201ENST00000425548 448 ntBASIC12.77□□□□□ -0.37
CLK1P49759 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC12.77□□□□□ -0.37
CLK1P49759 PFN2-206ENST00000461930 606 ntTSL 4 BASIC12.77□□□□□ -0.37
CLK1P49759 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC12.77□□□□□ -0.37
CLK1P49759 RN7SL258P-201ENST00000478664 300 ntBASIC12.77□□□□□ -0.37
CLK1P49759 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CLK1P49759 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
CLK1P49759 CMC2-204ENST00000562713 573 ntTSL 3 BASIC12.77□□□□□ -0.37
CLK1P49759 CMC2-209ENST00000565108 399 ntTSL 2 BASIC12.77□□□□□ -0.37
CLK1P49759 LINC01783-202ENST00000614408 828 ntBASIC12.77□□□□□ -0.37
CLK1P49759 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CLK1P49759 BX284668.2-205ENST00000619677 828 ntBASIC12.77□□□□□ -0.37
CLK1P49759 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CLK1P49759 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CLK1P49759 PPFIBP1-215ENST00000542629 3208 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CLK1P49759 FANCC-202ENST00000375305 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CLK1P49759 AC015818.9-201ENST00000591705 4582 ntBASIC12.77□□□□□ -0.37
CLK1P49759 ELP4-203ENST00000395934 1961 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CLK1P49759 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC12.77□□□□□ -0.37
CLK1P49759 SLC39A11-201ENST00000255559 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
CLK1P49759 PCDHGA6-201ENST00000517434 4775 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CLK1P49759 AC073335.2-201ENST00000610177 3441 ntBASIC12.77□□□□□ -0.37
CLK1P49759 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms