Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 FAM90A28P-201ENST00000596881 489 ntTSL 5 BASIC14.09□□□□□ -0.15
SLC1A1P43005 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
SLC1A1P43005 AC084346.2-201ENST00000607097 949 ntBASIC14.09□□□□□ -0.15
SLC1A1P43005 APEX1-201ENST00000216714 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC1A1P43005 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SLC1A1P43005 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SLC1A1P43005 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC1A1P43005 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC1A1P43005 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC14.09□□□□□ -0.15
SLC1A1P43005 KCNH4-202ENST00000607371 3723 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SLC1A1P43005 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC1A1P43005 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC1A1P43005 AC120114.4-201ENST00000623731 2194 ntBASIC14.09□□□□□ -0.15
SLC1A1P43005 CDC45-201ENST00000263201 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC1A1P43005 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SLC1A1P43005 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC1A1P43005 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
SLC1A1P43005 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC1A1P43005 ZFP69B-201ENST00000361584 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SLC1A1P43005 DDX5-210ENST00000578804 2021 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
SLC1A1P43005 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
SLC1A1P43005 MPPE1-204ENST00000344987 1831 ntTSL 5 BASIC14.08□□□□□ -0.15
SLC1A1P43005 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SLC1A1P43005 KIF17-202ENST00000375044 3572 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
SLC1A1P43005 NPTN-IT1-201ENST00000628401 2283 ntBASIC14.08□□□□□ -0.15
SLC1A1P43005 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SLC1A1P43005 AC092115.1-201ENST00000566277 1402 ntBASIC14.08□□□□□ -0.15
SLC1A1P43005 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC14.08□□□□□ -0.16
SLC1A1P43005 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SLC1A1P43005 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SLC1A1P43005 TBC1D3F-201ENST00000620210 2117 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
SLC1A1P43005 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SLC1A1P43005 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC14.08□□□□□ -0.16
SLC1A1P43005 C1QTNF3-202ENST00000382065 2802 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SLC1A1P43005 HPGD-204ENST00000504433 1910 ntTSL 2 BASIC14.08□□□□□ -0.16
SLC1A1P43005 SLC28A1-201ENST00000286749 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SLC1A1P43005 EFHC1-224ENST00000636702 2197 ntTSL 5 BASIC14.08□□□□□ -0.16
SLC1A1P43005 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SLC1A1P43005 AC022098.1-201ENST00000588387 2861 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SLC1A1P43005 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SLC1A1P43005 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SLC1A1P43005 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
SLC1A1P43005 PAEP-201ENST00000277508 821 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SLC1A1P43005 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SLC1A1P43005 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC14.08□□□□□ -0.16
SLC1A1P43005 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC14.08□□□□□ -0.16
SLC1A1P43005 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SLC1A1P43005 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
SLC1A1P43005 GULOP-201ENST00000454030 748 ntBASIC14.08□□□□□ -0.16
SLC1A1P43005 CHCHD2P9-201ENST00000461726 456 ntBASIC14.08□□□□□ -0.16
SLC1A1P43005 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
SLC1A1P43005 SUPT4H1P2-201ENST00000501248 353 ntBASIC14.08□□□□□ -0.16
SLC1A1P43005 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SLC1A1P43005 AC026583.1-201ENST00000561310 569 ntTSL 4 BASIC14.08□□□□□ -0.16
SLC1A1P43005 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SLC1A1P43005 AC007250.1-201ENST00000608934 338 ntBASIC14.08□□□□□ -0.16
SLC1A1P43005 AP001184.1-201ENST00000637936 376 ntBASIC14.08□□□□□ -0.16
SLC1A1P43005 JAML-211ENST00000533261 1508 ntTSL 5 BASIC14.08□□□□□ -0.16
SLC1A1P43005 CCDC175-201ENST00000281581 2487 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
SLC1A1P43005 POLD1-201ENST00000440232 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SLC1A1P43005 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SLC1A1P43005 FAM214B-205ENST00000488109 2999 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
SLC1A1P43005 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SLC1A1P43005 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC14.08□□□□□ -0.16
SLC1A1P43005 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SLC1A1P43005 RFWD3-201ENST00000361070 4957 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SLC1A1P43005 MOG-225ENST00000431798 1814 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
SLC1A1P43005 ECM1-202ENST00000369047 2070 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
SLC1A1P43005 RNF34-203ENST00000392465 2051 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
SLC1A1P43005 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC14.08□□□□□ -0.16
SLC1A1P43005 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC14.08□□□□□ -0.16
SLC1A1P43005 KCNJ11-201ENST00000339994 2801 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
SLC1A1P43005 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SLC1A1P43005 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC14.08□□□□□ -0.16
SLC1A1P43005 STPG4-201ENST00000294947 1621 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SLC1A1P43005 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC14.08□□□□□ -0.16
SLC1A1P43005 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC14.08□□□□□ -0.16
SLC1A1P43005 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
SLC1A1P43005 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLC1A1P43005 WDR60-202ENST00000407559 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLC1A1P43005 HEY2-202ENST00000368365 2461 ntTSL 2 BASIC14.07□□□□□ -0.16
SLC1A1P43005 SIRPA-204ENST00000622179 4570 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
SLC1A1P43005 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLC1A1P43005 PRIMPOL-201ENST00000314970 2289 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLC1A1P43005 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC14.07□□□□□ -0.16
SLC1A1P43005 MFSD8-241ENST00000641686 4991 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
SLC1A1P43005 CHIAP2-201ENST00000369743 2829 ntTSL 5 BASIC14.07□□□□□ -0.16
SLC1A1P43005 GLO1-201ENST00000373365 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLC1A1P43005 TBX4-202ENST00000393853 3398 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLC1A1P43005 KCTD21-AS1-207ENST00000600795 1549 ntBASIC14.07□□□□□ -0.16
SLC1A1P43005 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC14.07□□□□□ -0.16
SLC1A1P43005 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC14.07□□□□□ -0.16
SLC1A1P43005 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLC1A1P43005 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC14.07□□□□□ -0.16
SLC1A1P43005 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SLC1A1P43005 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC14.07□□□□□ -0.16
SLC1A1P43005 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC14.07□□□□□ -0.16
SLC1A1P43005 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC14.07□□□□□ -0.16
SLC1A1P43005 AL627422.1-201ENST00000434104 580 ntBASIC14.07□□□□□ -0.16
SLC1A1P43005 RPE-208ENST00000436630 1128 ntTSL 2 BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms