Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 FAM90A7P-201ENST00000382628 1395 ntBASIC15.41■□□□□ 0.06
TPM2P07951 FAM90A23P-201ENST00000400136 1395 ntBASIC15.41■□□□□ 0.06
TPM2P07951 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TPM2P07951 XIRP1-201ENST00000340369 6460 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
TPM2P07951 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TPM2P07951 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
TPM2P07951 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
TPM2P07951 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
TPM2P07951 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TPM2P07951 PARVG-202ENST00000415224 999 ntTSL 2 BASIC15.41■□□□□ 0.06
TPM2P07951 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TPM2P07951 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC15.41■□□□□ 0.06
TPM2P07951 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC15.41■□□□□ 0.06
TPM2P07951 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC15.41■□□□□ 0.06
TPM2P07951 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.41■□□□□ 0.06
TPM2P07951 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
TPM2P07951 AC005225.4-201ENST00000557330 545 ntBASIC15.41■□□□□ 0.06
TPM2P07951 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC15.41■□□□□ 0.06
TPM2P07951 CMC2-204ENST00000562713 573 ntTSL 3 BASIC15.41■□□□□ 0.06
TPM2P07951 CMC2-209ENST00000565108 399 ntTSL 2 BASIC15.41■□□□□ 0.06
TPM2P07951 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC15.41■□□□□ 0.06
TPM2P07951 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15.41■□□□□ 0.06
TPM2P07951 PI4KB-204ENST00000368875 3983 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
TPM2P07951 ZSCAN21-205ENST00000543588 1870 ntTSL 2 BASIC15.41■□□□□ 0.06
TPM2P07951 AC009533.1-201ENST00000539757 3158 ntBASIC15.41■□□□□ 0.06
TPM2P07951 FRMD6-203ENST00000395718 4828 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TPM2P07951 PCDHA10-202ENST00000506939 3788 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TPM2P07951 RP1-207ENST00000637698 6177 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TPM2P07951 USP38-201ENST00000307017 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TPM2P07951 RBM4-201ENST00000310092 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TPM2P07951 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TPM2P07951 SLC5A11-205ENST00000545376 2294 ntTSL 2 BASIC15.41■□□□□ 0.06
TPM2P07951 HLCS-207ENST00000612277 6112 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TPM2P07951 CLASP2-218ENST00000487200 1940 ntTSL 2 BASIC15.41■□□□□ 0.06
TPM2P07951 SPATA31C1-202ENST00000602681 1927 ntTSL 2 BASIC15.41■□□□□ 0.06
TPM2P07951 AC091170.1-201ENST00000582983 2190 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TPM2P07951 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TPM2P07951 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC15.41■□□□□ 0.06
TPM2P07951 ZNF606-204ENST00000547828 2680 ntTSL 2 BASIC15.4■□□□□ 0.06
TPM2P07951 RAB3IP-212ENST00000550536 9646 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TPM2P07951 CTCFL-217ENST00000608425 2915 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TPM2P07951 TNRC6B-203ENST00000402203 3444 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TPM2P07951 CHD3-203ENST00000380358 7356 ntTSL 2 BASIC15.4■□□□□ 0.06
TPM2P07951 SLC45A3-201ENST00000367145 3341 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TPM2P07951 PLD5-204ENST00000442594 3305 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
TPM2P07951 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
TPM2P07951 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC15.4■□□□□ 0.06
TPM2P07951 SDR16C5-203ENST00000522671 1988 ntTSL 2 BASIC15.4■□□□□ 0.06
TPM2P07951 ABL2-210ENST00000511413 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TPM2P07951 DHX30-207ENST00000457607 3748 ntTSL 5 BASIC15.4■□□□□ 0.06
TPM2P07951 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TPM2P07951 ARL4C-201ENST00000339728 3385 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TPM2P07951 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TPM2P07951 ZNF266-206ENST00000592292 3100 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
TPM2P07951 OPRK1-201ENST00000265572 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TPM2P07951 PLA2G6-203ENST00000402064 3011 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TPM2P07951 FHOD3-207ENST00000591635 3035 ntTSL 5 BASIC15.4■□□□□ 0.06
TPM2P07951 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TPM2P07951 PRR3-201ENST00000376557 1797 ntTSL 2 BASIC15.4■□□□□ 0.06
TPM2P07951 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TPM2P07951 CAMTA2-204ENST00000414043 4589 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TPM2P07951 SHPRH-202ENST00000367503 5237 ntTSL 5 BASIC15.4■□□□□ 0.06
TPM2P07951 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15.4■□□□□ 0.06
TPM2P07951 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC15.4■□□□□ 0.06
TPM2P07951 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.4■□□□□ 0.06
TPM2P07951 FAM21FP-201ENST00000426241 1131 ntBASIC15.4■□□□□ 0.06
TPM2P07951 CSF2RBP1-201ENST00000447905 391 ntBASIC15.4■□□□□ 0.06
TPM2P07951 HSPB1P2-201ENST00000448722 546 ntBASIC15.4■□□□□ 0.06
TPM2P07951 Z93015.1-201ENST00000451718 390 ntBASIC15.4■□□□□ 0.06
TPM2P07951 RNMTL1P1-201ENST00000454103 560 ntBASIC15.4■□□□□ 0.06
TPM2P07951 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TPM2P07951 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC15.4■□□□□ 0.06
TPM2P07951 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC15.4■□□□□ 0.06
TPM2P07951 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC15.4■□□□□ 0.06
TPM2P07951 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC15.4■□□□□ 0.06
TPM2P07951 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC15.4■□□□□ 0.06
TPM2P07951 AC010328.2-201ENST00000597698 1111 ntBASIC15.4■□□□□ 0.06
TPM2P07951 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC15.4■□□□□ 0.06
TPM2P07951 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TPM2P07951 AC093462.1-201ENST00000621167 1683 ntBASIC15.4■□□□□ 0.06
TPM2P07951 PPP6R2-209ENST00000612753 4104 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
TPM2P07951 TIGAR-204ENST00000635110 3633 ntTSL 5 BASIC15.4■□□□□ 0.06
TPM2P07951 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TPM2P07951 C1QTNF9B-202ENST00000382140 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TPM2P07951 TTC16-201ENST00000373289 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TPM2P07951 LIG1-221ENST00000613670 3949 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TPM2P07951 SLC8B1-213ENST00000552014 3289 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TPM2P07951 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
TPM2P07951 SHANK2-218ENST00000601538 9062 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
TPM2P07951 RABL2B-201ENST00000354869 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TPM2P07951 DPP3-215ENST00000541961 2676 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
TPM2P07951 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
TPM2P07951 METTL12-203ENST00000532971 2037 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TPM2P07951 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TPM2P07951 DGKZ-220ENST00000532868 3118 ntTSL 2 BASIC15.39■□□□□ 0.05
TPM2P07951 DNAI2-202ENST00000446837 2474 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
TPM2P07951 PRICKLE1-216ENST00000640132 4278 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TPM2P07951 ARHGAP33-203ENST00000314737 3858 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
TPM2P07951 BSDC1-201ENST00000341071 4599 ntTSL 2 BASIC15.39■□□□□ 0.05
TPM2P07951 GGTA1P-205ENST00000495328 3478 ntTSL 2 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms