Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 RN7SKP155-201ENST00000516031 288 ntBASIC13.55□□□□□ -0.24
APOA4P06727 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC13.55□□□□□ -0.24
APOA4P06727 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC13.55□□□□□ -0.24
APOA4P06727 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC13.55□□□□□ -0.24
APOA4P06727 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC13.55□□□□□ -0.24
APOA4P06727 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
APOA4P06727 AP000322.3-201ENST00000608665 388 ntBASIC13.55□□□□□ -0.24
APOA4P06727 SLC26A8-202ENST00000394602 3144 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
APOA4P06727 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
APOA4P06727 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
APOA4P06727 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
APOA4P06727 FN1-201ENST00000323926 8708 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
APOA4P06727 FAM53B-203ENST00000392754 3557 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
APOA4P06727 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
APOA4P06727 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
APOA4P06727 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
APOA4P06727 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
APOA4P06727 AC074138.1-201ENST00000611182 1303 ntBASIC13.55□□□□□ -0.24
APOA4P06727 PPP4R3B-203ENST00000611717 5243 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
APOA4P06727 AC005154.3-201ENST00000419639 1393 ntBASIC13.55□□□□□ -0.24
APOA4P06727 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC13.55□□□□□ -0.24
APOA4P06727 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
APOA4P06727 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
APOA4P06727 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
APOA4P06727 ZCRB1-201ENST00000266529 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
APOA4P06727 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
APOA4P06727 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
APOA4P06727 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
APOA4P06727 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC13.55□□□□□ -0.24
APOA4P06727 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
APOA4P06727 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOA4P06727 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOA4P06727 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOA4P06727 AC027369.3-201ENST00000530465 3707 ntBASIC13.54□□□□□ -0.24
APOA4P06727 AC092902.2-210ENST00000468859 1996 ntTSL 2 BASIC13.54□□□□□ -0.24
APOA4P06727 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOA4P06727 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOA4P06727 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
APOA4P06727 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOA4P06727 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOA4P06727 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOA4P06727 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC13.54□□□□□ -0.24
APOA4P06727 HNRNPH1-216ENST00000510411 2105 ntTSL 5 BASIC13.54□□□□□ -0.24
APOA4P06727 AC007336.3-201ENST00000623886 2160 ntBASIC13.54□□□□□ -0.24
APOA4P06727 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOA4P06727 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC13.54□□□□□ -0.24
APOA4P06727 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
APOA4P06727 VENTXP1-201ENST00000569334 2716 ntBASIC13.54□□□□□ -0.24
APOA4P06727 SOD2-202ENST00000367054 815 ntTSL 2 BASIC13.54□□□□□ -0.24
APOA4P06727 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
APOA4P06727 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC13.54□□□□□ -0.24
APOA4P06727 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC13.54□□□□□ -0.24
APOA4P06727 AL359979.2-201ENST00000435108 613 ntTSL 3 BASIC13.54□□□□□ -0.24
APOA4P06727 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC13.54□□□□□ -0.24
APOA4P06727 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC13.54□□□□□ -0.24
APOA4P06727 AC130709.1-201ENST00000484779 1212 ntBASIC13.54□□□□□ -0.24
APOA4P06727 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC13.54□□□□□ -0.24
APOA4P06727 DNM1P51-201ENST00000558149 522 ntBASIC13.54□□□□□ -0.24
APOA4P06727 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC13.54□□□□□ -0.24
APOA4P06727 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC13.54□□□□□ -0.24
APOA4P06727 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
APOA4P06727 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC13.54□□□□□ -0.24
APOA4P06727 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
APOA4P06727 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
APOA4P06727 TTC4-201ENST00000371281 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOA4P06727 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC13.54□□□□□ -0.24
APOA4P06727 PPFIA4-201ENST00000272198 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOA4P06727 ZNF771-204ENST00000566625 2415 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
APOA4P06727 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOA4P06727 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
APOA4P06727 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOA4P06727 MSANTD2P1-201ENST00000445341 1368 ntBASIC13.54□□□□□ -0.24
APOA4P06727 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC13.54□□□□□ -0.24
APOA4P06727 ARHGEF9-226ENST00000636392 1920 ntTSL 5 BASIC13.54□□□□□ -0.24
APOA4P06727 MESD-201ENST00000261758 4264 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOA4P06727 CSTF2-203ENST00000415585 2074 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
APOA4P06727 AL513497.1-201ENST00000624273 2083 ntBASIC13.54□□□□□ -0.24
APOA4P06727 DRD3-201ENST00000295881 1541 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
APOA4P06727 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC13.54□□□□□ -0.24
APOA4P06727 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
APOA4P06727 GK-203ENST00000378943 3707 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
APOA4P06727 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
APOA4P06727 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC13.53□□□□□ -0.24
APOA4P06727 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
APOA4P06727 SMARCA2-254ENST00000636903 2471 ntTSL 5 BASIC13.53□□□□□ -0.24
APOA4P06727 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
APOA4P06727 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
APOA4P06727 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC13.53□□□□□ -0.24
APOA4P06727 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
APOA4P06727 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC13.53□□□□□ -0.24
APOA4P06727 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
APOA4P06727 RHOH-222ENST00000617441 1872 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
APOA4P06727 CENPP-203ENST00000375587 8766 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
APOA4P06727 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC13.53□□□□□ -0.24
APOA4P06727 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
APOA4P06727 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC13.53□□□□□ -0.24
APOA4P06727 NCBP1-202ENST00000375147 5178 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
APOA4P06727 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC13.53□□□□□ -0.24
APOA4P06727 EPS8L3-201ENST00000361852 2130 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
APOA4P06727 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms