Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 DDC-212ENST00000615193 1674 ntTSL 3 BASIC11.07□□□□□ -0.64
RCL1Q9Y2P8 FOXN3-219ENST00000615335 2421 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
RCL1Q9Y2P8 PLEKHG5-205ENST00000377740 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
RCL1Q9Y2P8 NUP62-208ENST00000596217 3590 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
RCL1Q9Y2P8 MYT1-202ENST00000360149 2061 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
RCL1Q9Y2P8 POPDC2-208ENST00000493094 1837 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
RCL1Q9Y2P8 HACD3-210ENST00000568793 1824 ntTSL 5 BASIC11.07□□□□□ -0.64
RCL1Q9Y2P8 SEMA6A-202ENST00000343348 6878 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RCL1Q9Y2P8 IGSF9-201ENST00000361509 3996 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
RCL1Q9Y2P8 ADD1-207ENST00000446856 3745 ntTSL 5 BASIC11.07□□□□□ -0.64
RCL1Q9Y2P8 ABL2-202ENST00000367623 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
RCL1Q9Y2P8 CACUL1-201ENST00000369151 11311 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RCL1Q9Y2P8 STRA6-206ENST00000449139 2732 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
RCL1Q9Y2P8 KCNH1-209ENST00000639952 8075 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
RCL1Q9Y2P8 PLEKHM1P1-205ENST00000582986 5014 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
RCL1Q9Y2P8 DOK4-210ENST00000566936 2851 ntTSL 3 BASIC11.06□□□□□ -0.64
RCL1Q9Y2P8 COL19A1-205ENST00000620364 6233 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
RCL1Q9Y2P8 POLL-203ENST00000370162 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
RCL1Q9Y2P8 POM121L4P-202ENST00000427789 1891 ntBASIC11.06□□□□□ -0.64
RCL1Q9Y2P8 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
RCL1Q9Y2P8 PIK3R5-202ENST00000447110 4495 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
RCL1Q9Y2P8 DGKH-202ENST00000337343 4246 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
RCL1Q9Y2P8 LIMS1-204ENST00000409441 1627 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
RCL1Q9Y2P8 PALLD-209ENST00000507735 4379 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
RCL1Q9Y2P8 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
RCL1Q9Y2P8 KRT8P29-201ENST00000420409 1371 ntBASIC11.06□□□□□ -0.64
RCL1Q9Y2P8 CTAGE7P-201ENST00000435712 2436 ntBASIC11.06□□□□□ -0.64
RCL1Q9Y2P8 ZIC3-201ENST00000287538 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
RCL1Q9Y2P8 FGFR1OP-207ENST00000622353 3451 ntTSL 2 BASIC11.06□□□□□ -0.64
RCL1Q9Y2P8 CDH3-202ENST00000429102 3611 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
RCL1Q9Y2P8 MTHFR-205ENST00000376592 8378 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
RCL1Q9Y2P8 KRT78-202ENST00000359499 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
RCL1Q9Y2P8 DDR1-226ENST00000376569 3783 ntAPPRIS P3 TSL 5 BASIC11.06□□□□□ -0.64
RCL1Q9Y2P8 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
RCL1Q9Y2P8 TMEM185A-210ENST00000613273 1913 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
RCL1Q9Y2P8 AGAP3-226ENST00000622464 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
RCL1Q9Y2P8 PRRG4-201ENST00000257836 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
RCL1Q9Y2P8 PPP1R26P5-201ENST00000416640 3664 ntBASIC11.06□□□□□ -0.64
RCL1Q9Y2P8 MYO19-203ENST00000610930 3271 ntTSL 5 BASIC11.06□□□□□ -0.64
RCL1Q9Y2P8 KIAA1549-202ENST00000440172 12379 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
RCL1Q9Y2P8 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
RCL1Q9Y2P8 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
RCL1Q9Y2P8 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
RCL1Q9Y2P8 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
RCL1Q9Y2P8 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
RCL1Q9Y2P8 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC11.06□□□□□ -0.64
RCL1Q9Y2P8 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC11.06□□□□□ -0.64
RCL1Q9Y2P8 FAM207CP-201ENST00000443486 507 ntBASIC11.06□□□□□ -0.64
RCL1Q9Y2P8 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC11.06□□□□□ -0.64
RCL1Q9Y2P8 AC092183.1-201ENST00000469884 875 ntBASIC11.06□□□□□ -0.64
RCL1Q9Y2P8 MYOZ3-205ENST00000520112 605 ntTSL 4 BASIC11.06□□□□□ -0.64
RCL1Q9Y2P8 RFPL4AP1-201ENST00000530883 850 ntBASIC11.06□□□□□ -0.64
RCL1Q9Y2P8 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC11.06□□□□□ -0.64
RCL1Q9Y2P8 TP53TG3HP-202ENST00000569755 579 ntBASIC11.06□□□□□ -0.64
RCL1Q9Y2P8 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
RCL1Q9Y2P8 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC11.06□□□□□ -0.64
RCL1Q9Y2P8 AL022328.1-201ENST00000610050 478 ntBASIC11.06□□□□□ -0.64
RCL1Q9Y2P8 ACSL6-207ENST00000379264 6539 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
RCL1Q9Y2P8 TEF-202ENST00000406644 4386 ntTSL 2 BASIC11.06□□□□□ -0.64
RCL1Q9Y2P8 WWP2-202ENST00000359154 4515 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
RCL1Q9Y2P8 LOXHD1-204ENST00000398705 1824 ntTSL 2 BASIC11.06□□□□□ -0.64
RCL1Q9Y2P8 ZNF461-201ENST00000360357 2361 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
RCL1Q9Y2P8 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
RCL1Q9Y2P8 EPB42-202ENST00000441366 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
RCL1Q9Y2P8 USP24-201ENST00000294383 10549 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
RCL1Q9Y2P8 SHANK2-218ENST00000601538 9062 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
RCL1Q9Y2P8 PID1-203ENST00000392055 2533 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
RCL1Q9Y2P8 LINC01544-201ENST00000567801 5168 ntTSL 2 BASIC11.06□□□□□ -0.64
RCL1Q9Y2P8 TRIM37-202ENST00000393065 3548 ntTSL 2 BASIC11.06□□□□□ -0.64
RCL1Q9Y2P8 ZNF621-201ENST00000310898 2404 ntTSL 2 BASIC11.06□□□□□ -0.64
RCL1Q9Y2P8 SLC26A4-201ENST00000265715 4930 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
RCL1Q9Y2P8 AL162231.4-201ENST00000564224 3264 ntTSL 2 BASIC11.06□□□□□ -0.64
RCL1Q9Y2P8 YTHDF2-208ENST00000541996 2719 ntTSL 2 BASIC11.06□□□□□ -0.64
RCL1Q9Y2P8 NLRP2-206ENST00000427260 3411 ntTSL 2 BASIC11.06□□□□□ -0.64
RCL1Q9Y2P8 LRRC8E-201ENST00000306708 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
RCL1Q9Y2P8 ALPL-203ENST00000374832 2193 ntAPPRIS P3 TSL 2 BASIC11.06□□□□□ -0.64
RCL1Q9Y2P8 BIVM-202ENST00000448849 3198 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
RCL1Q9Y2P8 CDH1-212ENST00000611625 4878 ntTSL 5 BASIC11.06□□□□□ -0.64
RCL1Q9Y2P8 UMPS-201ENST00000232607 6738 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
RCL1Q9Y2P8 CEP68-201ENST00000260569 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
RCL1Q9Y2P8 EDEM2-201ENST00000374491 1756 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
RCL1Q9Y2P8 NMRAL2P-204ENST00000423298 1792 ntTSL 5 BASIC11.05□□□□□ -0.64
RCL1Q9Y2P8 ARL4A-203ENST00000396663 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
RCL1Q9Y2P8 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC11.05□□□□□ -0.64
RCL1Q9Y2P8 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
RCL1Q9Y2P8 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
RCL1Q9Y2P8 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC11.05□□□□□ -0.64
RCL1Q9Y2P8 IWS1-201ENST00000295321 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
RCL1Q9Y2P8 FARS2-201ENST00000274680 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
RCL1Q9Y2P8 MKL1-212ENST00000618417 1842 ntTSL 5 BASIC11.05□□□□□ -0.64
RCL1Q9Y2P8 TRIM32-203ENST00000450136 3717 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
RCL1Q9Y2P8 MSH6-213ENST00000614496 4150 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
RCL1Q9Y2P8 NPLOC4-202ENST00000374747 5538 ntTSL 2 BASIC11.05□□□□□ -0.64
RCL1Q9Y2P8 LHX6-204ENST00000394319 3465 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
RCL1Q9Y2P8 BAIAP3-215ENST00000568887 3763 ntTSL 2 BASIC11.05□□□□□ -0.64
RCL1Q9Y2P8 IL21R-201ENST00000337929 4849 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
RCL1Q9Y2P8 TP73-206ENST00000378288 5120 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
RCL1Q9Y2P8 SEC14L1-204ENST00000436233 5295 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
RCL1Q9Y2P8 NECTIN2-201ENST00000252483 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
RCL1Q9Y2P8 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms