Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SSR1P43307 COL19A1-205ENST00000620364 6233 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SSR1P43307 AP000437.1-201ENST00000624057 2085 ntBASIC14.48□□□□□ -0.09
SSR1P43307 AC010970.1-201ENST00000445125 1848 ntBASIC14.48□□□□□ -0.09
SSR1P43307 ADRA1A-210ENST00000519229 1838 ntTSL 5 BASIC14.48□□□□□ -0.09
SSR1P43307 TEKT4P2-202ENST00000559466 1312 ntBASIC14.48□□□□□ -0.09
SSR1P43307 RHOH-217ENST00000610353 2268 ntAPPRIS P1 TSL 4 BASIC14.48□□□□□ -0.09
SSR1P43307 AC010969.2-201ENST00000602458 3231 ntBASIC14.48□□□□□ -0.09
SSR1P43307 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SSR1P43307 EDRF1-201ENST00000337623 4387 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
SSR1P43307 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SSR1P43307 MIR1307-201ENST00000408840 149 ntBASIC14.48□□□□□ -0.09
SSR1P43307 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC14.48□□□□□ -0.09
SSR1P43307 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC14.48□□□□□ -0.09
SSR1P43307 AC012618.1-201ENST00000461223 412 ntBASIC14.48□□□□□ -0.09
SSR1P43307 KRT8P13-201ENST00000463294 1010 ntBASIC14.48□□□□□ -0.09
SSR1P43307 AC099548.2-209ENST00000480264 625 ntBASIC14.48□□□□□ -0.09
SSR1P43307 HIST2H2BC-201ENST00000498492 580 ntBASIC14.48□□□□□ -0.09
SSR1P43307 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC14.48□□□□□ -0.09
SSR1P43307 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC14.48□□□□□ -0.09
SSR1P43307 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SSR1P43307 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
SSR1P43307 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC14.48□□□□□ -0.09
SSR1P43307 PHBP15-201ENST00000574228 665 ntBASIC14.48□□□□□ -0.09
SSR1P43307 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC14.48□□□□□ -0.09
SSR1P43307 AC007326.1-201ENST00000604539 458 ntBASIC14.48□□□□□ -0.09
SSR1P43307 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC14.48□□□□□ -0.09
SSR1P43307 PCDHGA12-201ENST00000252085 4747 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
SSR1P43307 FER1L5-207ENST00000641731 6294 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
SSR1P43307 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC14.48□□□□□ -0.09
SSR1P43307 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SSR1P43307 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
SSR1P43307 GRM4-202ENST00000374181 7275 ntTSL 5 BASIC14.48□□□□□ -0.09
SSR1P43307 ESR2-213ENST00000557772 5458 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SSR1P43307 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SSR1P43307 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC14.48□□□□□ -0.09
SSR1P43307 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SSR1P43307 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC14.48□□□□□ -0.09
SSR1P43307 ILDR1-201ENST00000273691 2659 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
SSR1P43307 MROH7-TTC4-201ENST00000414150 5867 ntAPPRIS P5 TSL 2 BASIC14.48□□□□□ -0.09
SSR1P43307 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SSR1P43307 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SSR1P43307 RBM15-204ENST00000617047 3284 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SSR1P43307 AC010536.1-201ENST00000538868 2611 ntBASIC14.47□□□□□ -0.09
SSR1P43307 SLC26A4-201ENST00000265715 4930 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SSR1P43307 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC14.47□□□□□ -0.09
SSR1P43307 PPFIBP1-215ENST00000542629 3208 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SSR1P43307 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SSR1P43307 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SSR1P43307 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SSR1P43307 ZFC3H1-201ENST00000378743 7285 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SSR1P43307 KDM7A-201ENST00000397560 9272 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
SSR1P43307 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
SSR1P43307 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SSR1P43307 SLC26A8-202ENST00000394602 3144 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SSR1P43307 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC14.47□□□□□ -0.09
SSR1P43307 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
SSR1P43307 FAM131B-203ENST00000409408 5856 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
SSR1P43307 MEP1A-201ENST00000230588 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SSR1P43307 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SSR1P43307 SMARCA2-254ENST00000636903 2471 ntTSL 5 BASIC14.47□□□□□ -0.09
SSR1P43307 RNF125-201ENST00000217740 6020 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SSR1P43307 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
SSR1P43307 PNPLA7-202ENST00000406427 4806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SSR1P43307 AC138028.6-201ENST00000616106 1482 ntBASIC14.47□□□□□ -0.09
SSR1P43307 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SSR1P43307 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SSR1P43307 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC14.47□□□□□ -0.09
SSR1P43307 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC14.47□□□□□ -0.09
SSR1P43307 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SSR1P43307 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC14.47□□□□□ -0.09
SSR1P43307 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC14.47□□□□□ -0.09
SSR1P43307 AKR7A2P1-201ENST00000460134 915 ntBASIC14.47□□□□□ -0.09
SSR1P43307 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC14.47□□□□□ -0.09
SSR1P43307 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC14.47□□□□□ -0.09
SSR1P43307 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC14.47□□□□□ -0.09
SSR1P43307 COQ10BP2-201ENST00000513804 724 ntBASIC14.47□□□□□ -0.09
SSR1P43307 AC114947.1-202ENST00000514136 344 ntBASIC14.47□□□□□ -0.09
SSR1P43307 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC14.47□□□□□ -0.09
SSR1P43307 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SSR1P43307 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC14.47□□□□□ -0.09
SSR1P43307 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC14.47□□□□□ -0.09
SSR1P43307 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC14.47□□□□□ -0.09
SSR1P43307 C17orf51-201ENST00000391411 7914 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SSR1P43307 POLE-201ENST00000320574 7840 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SSR1P43307 DMBT1-201ENST00000330163 5802 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SSR1P43307 DMBT1-206ENST00000368956 5802 ntTSL 5 BASIC14.47□□□□□ -0.09
SSR1P43307 ZNF706-209ENST00000520347 3502 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
SSR1P43307 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC14.47□□□□□ -0.09
SSR1P43307 VMP1-201ENST00000262291 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SSR1P43307 ZFYVE19-202ENST00000336455 1784 ntTSL 2 BASIC14.47□□□□□ -0.09
SSR1P43307 EDARADD-202ENST00000359362 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SSR1P43307 RALGPS2-203ENST00000367634 7512 ntTSL 2 BASIC14.47□□□□□ -0.09
SSR1P43307 KDM6A-214ENST00000621147 2876 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SSR1P43307 ZFR-201ENST00000265069 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SSR1P43307 NLRP2-202ENST00000339757 3422 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
SSR1P43307 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SSR1P43307 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SSR1P43307 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SSR1P43307 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms