Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CCDC112Q8NEF3 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC14.99□□□□□ -0.01
CCDC112Q8NEF3 SLCO2A1-208ENST00000493729 1918 ntTSL 5 BASIC14.99□□□□□ -0.01
CCDC112Q8NEF3 HSPA12A-201ENST00000369209 5722 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC112Q8NEF3 HYOU1-217ENST00000612687 4360 ntTSL 5 BASIC14.99□□□□□ -0.01
CCDC112Q8NEF3 FGF23-201ENST00000237837 3018 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC112Q8NEF3 NBPF1-203ENST00000430580 5932 ntAPPRIS P5 TSL 5 BASIC14.99□□□□□ -0.01
CCDC112Q8NEF3 DHX30-206ENST00000446256 3660 ntAPPRIS P2 TSL 2 BASIC14.99□□□□□ -0.01
CCDC112Q8NEF3 POLL-203ENST00000370162 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC112Q8NEF3 NRXN1-233ENST00000630543 4500 ntTSL 5 BASIC14.99□□□□□ -0.01
CCDC112Q8NEF3 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
CCDC112Q8NEF3 AC006144.1-201ENST00000424220 1600 ntBASIC14.99□□□□□ -0.01
CCDC112Q8NEF3 SELPLG-203ENST00000550948 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC112Q8NEF3 TOP3B-202ENST00000398793 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC112Q8NEF3 SMARCA2-254ENST00000636903 2471 ntTSL 5 BASIC14.99□□□□□ -0.01
CCDC112Q8NEF3 MOG-225ENST00000431798 1814 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
CCDC112Q8NEF3 PCSK7-215ENST00000540028 3332 ntTSL 2 BASIC14.99□□□□□ -0.01
CCDC112Q8NEF3 RAP1A-202ENST00000369709 5024 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC112Q8NEF3 CACNA1C-209ENST00000399603 7377 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
CCDC112Q8NEF3 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC14.98□□□□□ -0.01
CCDC112Q8NEF3 KLHL23-202ENST00000392647 4077 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC112Q8NEF3 AXIN2-209ENST00000618960 4060 ntTSL 5 BASIC14.98□□□□□ -0.01
CCDC112Q8NEF3 TRNAU1AP-201ENST00000373830 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC112Q8NEF3 CD27-AS1-209ENST00000545339 1766 ntTSL 5 BASIC14.98□□□□□ -0.01
CCDC112Q8NEF3 BDNF-202ENST00000356660 4018 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC112Q8NEF3 MAP3K9-205ENST00000554752 11169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC112Q8NEF3 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC112Q8NEF3 PALLD-209ENST00000507735 4379 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC112Q8NEF3 STOX2-201ENST00000308497 10458 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC112Q8NEF3 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC112Q8NEF3 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC112Q8NEF3 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC14.98□□□□□ -0.01
CCDC112Q8NEF3 RAD1-203ENST00000382038 5770 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC112Q8NEF3 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC14.98□□□□□ -0.01
CCDC112Q8NEF3 UGT1A5-201ENST00000373414 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC112Q8NEF3 VWA5B1-201ENST00000289815 4475 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CCDC112Q8NEF3 SOX30-201ENST00000265007 3265 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC112Q8NEF3 AC009108.4-201ENST00000623284 2451 ntBASIC14.98□□□□□ -0.01
CCDC112Q8NEF3 RHOH-217ENST00000610353 2268 ntAPPRIS P1 TSL 4 BASIC14.98□□□□□ -0.01
CCDC112Q8NEF3 PRAME-203ENST00000402697 2057 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
CCDC112Q8NEF3 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CCDC112Q8NEF3 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC14.98□□□□□ -0.01
CCDC112Q8NEF3 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC112Q8NEF3 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC112Q8NEF3 BNIP3P42-201ENST00000454982 569 ntBASIC14.98□□□□□ -0.01
CCDC112Q8NEF3 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC14.98□□□□□ -0.01
CCDC112Q8NEF3 USB1-203ENST00000539737 1212 ntTSL 2 BASIC14.98□□□□□ -0.01
CCDC112Q8NEF3 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC112Q8NEF3 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC14.98□□□□□ -0.01
CCDC112Q8NEF3 RN7SL219P-201ENST00000582872 296 ntBASIC14.98□□□□□ -0.01
CCDC112Q8NEF3 BNIP3P29-201ENST00000598302 571 ntBASIC14.98□□□□□ -0.01
CCDC112Q8NEF3 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC14.98□□□□□ -0.01
CCDC112Q8NEF3 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC14.98□□□□□ -0.01
CCDC112Q8NEF3 AC011447.5-201ENST00000616168 564 ntBASIC14.98□□□□□ -0.01
CCDC112Q8NEF3 PAX6-207ENST00000379129 2614 ntAPPRIS P4 TSL 5 BASIC14.98□□□□□ -0.01
CCDC112Q8NEF3 NLRP2-214ENST00000543010 3576 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC112Q8NEF3 SMIM21-202ENST00000579022 1834 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC112Q8NEF3 ERCC5-201ENST00000355739 5082 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC112Q8NEF3 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC112Q8NEF3 PIK3CD-202ENST00000377346 5203 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC112Q8NEF3 MEIS2-215ENST00000559561 1442 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
CCDC112Q8NEF3 RBM10-206ENST00000628161 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC112Q8NEF3 FILIP1L-203ENST00000383694 3280 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC112Q8NEF3 CCDC88A-214ENST00000621814 3089 ntTSL 5 BASIC14.98□□□□□ -0.01
CCDC112Q8NEF3 CPNE4-201ENST00000429747 4184 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC112Q8NEF3 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC14.98□□□□□ -0.01
CCDC112Q8NEF3 CHD4-211ENST00000544484 6554 ntTSL 2 BASIC14.98□□□□□ -0.01
CCDC112Q8NEF3 CENPP-203ENST00000375587 8766 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC112Q8NEF3 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC112Q8NEF3 C12orf56-201ENST00000333722 3936 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC112Q8NEF3 CTRL-205ENST00000574481 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC112Q8NEF3 RTL10-201ENST00000328554 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC112Q8NEF3 ANKRD20A7P-201ENST00000402318 2414 ntBASIC14.97□□□□□ -0.01
CCDC112Q8NEF3 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC14.97□□□□□ -0.01
CCDC112Q8NEF3 STK11IP-204ENST00000456909 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC112Q8NEF3 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC112Q8NEF3 AFF2-202ENST00000342251 7313 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC112Q8NEF3 FBXO5-201ENST00000229758 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC112Q8NEF3 EPB42-202ENST00000441366 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC112Q8NEF3 DMBX1-201ENST00000360032 2880 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC112Q8NEF3 RGS6-203ENST00000402788 5400 ntTSL 2 BASIC14.97□□□□□ -0.01
CCDC112Q8NEF3 PTPRN2-203ENST00000389418 4706 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC112Q8NEF3 DDO-201ENST00000368923 1953 ntTSL 2 BASIC14.97□□□□□ -0.01
CCDC112Q8NEF3 CACNA1G-207ENST00000429973 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC112Q8NEF3 CACNA1G-217ENST00000507336 7116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC112Q8NEF3 FAM161A-203ENST00000405894 3684 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC112Q8NEF3 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC112Q8NEF3 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC112Q8NEF3 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC112Q8NEF3 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC112Q8NEF3 CHCHD1-202ENST00000372837 1202 ntTSL 2 BASIC14.97□□□□□ -0.01
CCDC112Q8NEF3 GZMB-202ENST00000382540 816 ntTSL 5 BASIC14.97□□□□□ -0.01
CCDC112Q8NEF3 NBPF17P-201ENST00000401087 2119 ntBASIC14.97□□□□□ -0.01
CCDC112Q8NEF3 BRWD1P1-201ENST00000401091 371 ntBASIC14.97□□□□□ -0.01
CCDC112Q8NEF3 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC14.97□□□□□ -0.01
CCDC112Q8NEF3 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC112Q8NEF3 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC14.97□□□□□ -0.01
CCDC112Q8NEF3 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CCDC112Q8NEF3 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
CCDC112Q8NEF3 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms