Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CASP4P49662 KCNT1-213ENST00000630792 3606 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CASP4P49662 SLC16A2-201ENST00000587091 4161 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CASP4P49662 TGM1-202ENST00000544573 1581 ntTSL 2 BASIC14.68□□□□□ -0.06
CASP4P49662 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CASP4P49662 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
CASP4P49662 CYP24A1-203ENST00000395955 2227 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CASP4P49662 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CASP4P49662 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CASP4P49662 SH2D3C-202ENST00000373276 3051 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CASP4P49662 AC012358.2-201ENST00000430010 1434 ntBASIC14.67□□□□□ -0.06
CASP4P49662 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.67□□□□□ -0.06
CASP4P49662 ECI2-207ENST00000465828 1548 ntTSL 5 BASIC14.67□□□□□ -0.06
CASP4P49662 HDGF-203ENST00000368209 2171 ntTSL 2 BASIC14.67□□□□□ -0.06
CASP4P49662 HOPX-202ENST00000337881 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CASP4P49662 SERPINA1-205ENST00000404814 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CASP4P49662 AC006144.1-201ENST00000424220 1600 ntBASIC14.67□□□□□ -0.06
CASP4P49662 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC14.67□□□□□ -0.06
CASP4P49662 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC14.67□□□□□ -0.06
CASP4P49662 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CASP4P49662 C9orf170-201ENST00000623052 3239 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CASP4P49662 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CASP4P49662 ZNF606-204ENST00000547828 2680 ntTSL 2 BASIC14.67□□□□□ -0.06
CASP4P49662 PPARG-206ENST00000397012 2006 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CASP4P49662 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CASP4P49662 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CASP4P49662 U3.5-201ENST00000363448 216 ntBASIC14.67□□□□□ -0.06
CASP4P49662 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC14.67□□□□□ -0.06
CASP4P49662 LINC00700-202ENST00000438372 777 ntTSL 5 BASIC14.67□□□□□ -0.06
CASP4P49662 LAMTOR4-202ENST00000441173 730 ntTSL 2 BASIC14.67□□□□□ -0.06
CASP4P49662 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC14.67□□□□□ -0.06
CASP4P49662 RPS2P36-201ENST00000456516 831 ntBASIC14.67□□□□□ -0.06
CASP4P49662 RN7SL23P-201ENST00000484055 275 ntBASIC14.67□□□□□ -0.06
CASP4P49662 KRT18P37-201ENST00000520711 1282 ntBASIC14.67□□□□□ -0.06
CASP4P49662 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC14.67□□□□□ -0.06
CASP4P49662 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC14.67□□□□□ -0.06
CASP4P49662 LINC00677-201ENST00000558224 486 ntTSL 3 BASIC14.67□□□□□ -0.06
CASP4P49662 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC14.67□□□□□ -0.06
CASP4P49662 AC026304.1-201ENST00000597953 561 ntBASIC14.67□□□□□ -0.06
CASP4P49662 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC14.67□□□□□ -0.06
CASP4P49662 U62317.3-201ENST00000608319 855 ntBASIC14.67□□□□□ -0.06
CASP4P49662 AC105137.3-201ENST00000617588 984 ntBASIC14.67□□□□□ -0.06
CASP4P49662 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC14.67□□□□□ -0.06
CASP4P49662 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CASP4P49662 TGM5-207ENST00000622115 2202 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CASP4P49662 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CASP4P49662 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CASP4P49662 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC14.67□□□□□ -0.06
CASP4P49662 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CASP4P49662 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
CASP4P49662 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CASP4P49662 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CASP4P49662 MAGED4-201ENST00000375626 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CASP4P49662 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC14.67□□□□□ -0.06
CASP4P49662 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CASP4P49662 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CASP4P49662 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC14.66□□□□□ -0.06
CASP4P49662 SRL-202ENST00000537996 1814 ntTSL 2 BASIC14.66□□□□□ -0.06
CASP4P49662 SLC23A1-202ENST00000353963 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CASP4P49662 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
CASP4P49662 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC14.66□□□□□ -0.06
CASP4P49662 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC14.66□□□□□ -0.06
CASP4P49662 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CASP4P49662 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CASP4P49662 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CASP4P49662 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CASP4P49662 PAX3-205ENST00000392069 3170 ntTSL 5 BASIC14.66□□□□□ -0.06
CASP4P49662 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CASP4P49662 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC14.66□□□□□ -0.06
CASP4P49662 ATP6V0D1-218ENST00000602876 1554 ntTSL 5 BASIC14.66□□□□□ -0.06
CASP4P49662 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CASP4P49662 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CASP4P49662 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CASP4P49662 RHOC-205ENST00000369636 786 ntTSL 2 BASIC14.66□□□□□ -0.06
CASP4P49662 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CASP4P49662 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC14.66□□□□□ -0.06
CASP4P49662 MRPL36-201ENST00000382647 587 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
CASP4P49662 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CASP4P49662 AC024028.1-201ENST00000437145 437 ntTSL 3 BASIC14.66□□□□□ -0.06
CASP4P49662 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CASP4P49662 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC14.66□□□□□ -0.06
CASP4P49662 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CASP4P49662 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC14.66□□□□□ -0.06
CASP4P49662 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC14.66□□□□□ -0.06
CASP4P49662 AP001120.3-201ENST00000585729 489 ntBASIC14.66□□□□□ -0.06
CASP4P49662 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC14.66□□□□□ -0.06
CASP4P49662 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC14.66□□□□□ -0.06
CASP4P49662 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
CASP4P49662 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC14.66□□□□□ -0.06
CASP4P49662 AC137723.2-201ENST00000623540 398 ntBASIC14.66□□□□□ -0.06
CASP4P49662 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CASP4P49662 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CASP4P49662 SCARA5-202ENST00000380385 2934 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CASP4P49662 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC14.66□□□□□ -0.06
CASP4P49662 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CASP4P49662 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CASP4P49662 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC14.66□□□□□ -0.06
CASP4P49662 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC14.66□□□□□ -0.06
CASP4P49662 BIVM-202ENST00000448849 3198 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CASP4P49662 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms