Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TPM3P06753 LINC01973-201ENST00000374983 4678 ntTSL 2 BASIC15.19■□□□□ 0.02
TPM3P06753 AC022098.1-201ENST00000588387 2861 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TPM3P06753 CAMSAP1-202ENST00000389532 7696 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
TPM3P06753 ZNF221-205ENST00000622072 2102 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TPM3P06753 GAS7-219ENST00000585266 3535 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TPM3P06753 RUNX2-AS1-201ENST00000563807 1513 ntTSL 5 BASIC15.19■□□□□ 0.02
TPM3P06753 MATR3-233ENST00000504203 2243 ntTSL 2 BASIC15.19■□□□□ 0.02
TPM3P06753 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TPM3P06753 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TPM3P06753 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TPM3P06753 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TPM3P06753 NAPB-201ENST00000377026 3837 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TPM3P06753 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC15.19■□□□□ 0.02
TPM3P06753 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC15.19■□□□□ 0.02
TPM3P06753 TSPY25P-201ENST00000429463 745 ntBASIC15.19■□□□□ 0.02
TPM3P06753 AC026954.1-201ENST00000429771 1293 ntBASIC15.19■□□□□ 0.02
TPM3P06753 ATP6V0CP2-201ENST00000469409 207 ntBASIC15.19■□□□□ 0.02
TPM3P06753 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TPM3P06753 HLA-J-204ENST00000495278 958 ntBASIC15.19■□□□□ 0.02
TPM3P06753 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC15.19■□□□□ 0.02
TPM3P06753 CYGB-203ENST00000589145 788 ntTSL 3 BASIC15.19■□□□□ 0.02
TPM3P06753 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC15.19■□□□□ 0.02
TPM3P06753 AC079336.7-201ENST00000623428 1078 ntBASIC15.19■□□□□ 0.02
TPM3P06753 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC15.19■□□□□ 0.02
TPM3P06753 ATAT1-202ENST00000319027 2061 ntTSL 2 BASIC15.19■□□□□ 0.02
TPM3P06753 FRMD1-205ENST00000440994 2857 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
TPM3P06753 AC080013.1-204ENST00000607426 2185 ntBASIC15.19■□□□□ 0.02
TPM3P06753 GADL1-201ENST00000282538 3759 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
TPM3P06753 VSTM2A-201ENST00000302287 3401 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TPM3P06753 LIN28B-203ENST00000637759 2635 ntTSL 5 BASIC15.19■□□□□ 0.02
TPM3P06753 CASC15-204ENST00000606197 3969 ntTSL 2 BASIC15.19■□□□□ 0.02
TPM3P06753 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC15.19■□□□□ 0.02
TPM3P06753 SLCO2A1-208ENST00000493729 1918 ntTSL 5 BASIC15.19■□□□□ 0.02
TPM3P06753 LRRC8A-201ENST00000259324 4619 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TPM3P06753 CCT8-201ENST00000286788 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TPM3P06753 KIAA1324-210ENST00000529753 2903 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TPM3P06753 TRUB2-201ENST00000372890 5719 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TPM3P06753 PHLPP2-204ENST00000567016 4812 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
TPM3P06753 NRAP-201ENST00000359988 5580 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TPM3P06753 TRMT10B-203ENST00000377754 1881 ntTSL 2 BASIC15.18■□□□□ 0.02
TPM3P06753 CPNE1-201ENST00000317677 1961 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TPM3P06753 FAM131B-204ENST00000409578 4286 ntTSL 5 BASIC15.18■□□□□ 0.02
TPM3P06753 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
TPM3P06753 TMEM94-201ENST00000314256 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TPM3P06753 POLE-201ENST00000320574 7840 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TPM3P06753 COX18-201ENST00000295890 6846 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TPM3P06753 FAM225B-201ENST00000423546 5629 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TPM3P06753 SLC5A11-202ENST00000424767 2399 ntTSL 2 BASIC15.18■□□□□ 0.02
TPM3P06753 CPT1A-205ENST00000539743 2382 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TPM3P06753 NFIX-201ENST00000358552 1727 ntTSL 5 BASIC15.18■□□□□ 0.02
TPM3P06753 SMARCA2-254ENST00000636903 2471 ntTSL 5 BASIC15.18■□□□□ 0.02
TPM3P06753 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TPM3P06753 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TPM3P06753 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TPM3P06753 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC15.18■□□□□ 0.02
TPM3P06753 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TPM3P06753 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TPM3P06753 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC15.18■□□□□ 0.02
TPM3P06753 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC15.18■□□□□ 0.02
TPM3P06753 KLF2P4-201ENST00000451959 1225 ntBASIC15.18■□□□□ 0.02
TPM3P06753 RN7SL530P-201ENST00000485097 298 ntBASIC15.18■□□□□ 0.02
TPM3P06753 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TPM3P06753 AC005740.1-201ENST00000515639 522 ntBASIC15.18■□□□□ 0.02
TPM3P06753 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC15.18■□□□□ 0.02
TPM3P06753 MIR3615-201ENST00000581999 87 ntBASIC15.18■□□□□ 0.02
TPM3P06753 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC15.18■□□□□ 0.02
TPM3P06753 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC15.18■□□□□ 0.02
TPM3P06753 KLK11-210ENST00000600362 759 ntTSL 3 BASIC15.18■□□□□ 0.02
TPM3P06753 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC15.18■□□□□ 0.02
TPM3P06753 SRRM4-201ENST00000267260 8477 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TPM3P06753 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TPM3P06753 CAST-206ENST00000395812 4506 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
TPM3P06753 SLC26A6-204ENST00000383733 2545 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TPM3P06753 MROH7-TTC4-201ENST00000414150 5867 ntAPPRIS P5 TSL 2 BASIC15.18■□□□□ 0.02
TPM3P06753 GUCY1A3-205ENST00000506455 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TPM3P06753 ENTPD3-203ENST00000445129 1658 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TPM3P06753 LINC00943-204ENST00000537374 1688 ntTSL 5 BASIC15.18■□□□□ 0.02
TPM3P06753 CICP18-201ENST00000406017 2812 ntBASIC15.18■□□□□ 0.02
TPM3P06753 LMBR1L-201ENST00000267102 2934 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TPM3P06753 P2RY8-201ENST00000381297 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TPM3P06753 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
TPM3P06753 PLK4-209ENST00000513090 3123 ntTSL 2 BASIC15.18■□□□□ 0.02
TPM3P06753 SMG8-202ENST00000543872 3477 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TPM3P06753 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TPM3P06753 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TPM3P06753 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TPM3P06753 NT5C3A-214ENST00000620705 1704 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TPM3P06753 GEMIN5-201ENST00000285873 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TPM3P06753 LINC01134-202ENST00000439488 1940 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TPM3P06753 TTN-AS1-209ENST00000456053 2033 ntTSL 2 BASIC15.17■□□□□ 0.02
TPM3P06753 AC243964.3-201ENST00000623022 2028 ntBASIC15.17■□□□□ 0.02
TPM3P06753 MYO1D-206ENST00000579584 3500 ntTSL 2 BASIC15.17■□□□□ 0.02
TPM3P06753 PLOD2-201ENST00000282903 3732 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
TPM3P06753 BTBD3-203ENST00000399006 4826 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
TPM3P06753 C4orf33-201ENST00000281146 6170 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TPM3P06753 VDR-202ENST00000395324 4762 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
TPM3P06753 ELN-204ENST00000357036 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TPM3P06753 DMBX1-201ENST00000360032 2880 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TPM3P06753 AL450468.2-201ENST00000565955 1889 ntBASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms