Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 NRF1-202ENST00000311967 2481 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
GAPDHP04406 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
GAPDHP04406 TEKT4P2-202ENST00000559466 1312 ntBASIC11.37□□□□□ -0.59
GAPDHP04406 POTEI-203ENST00000631234 2072 ntTSL 2 BASIC11.37□□□□□ -0.59
GAPDHP04406 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
GAPDHP04406 IFT122-204ENST00000349441 3569 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
GAPDHP04406 PSME3-217ENST00000622892 3183 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
GAPDHP04406 DHRS7B-202ENST00000395511 2175 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
GAPDHP04406 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
GAPDHP04406 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
GAPDHP04406 XRCC3-202ENST00000553264 3018 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
GAPDHP04406 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC11.37□□□□□ -0.59
GAPDHP04406 CXCL5-201ENST00000296027 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
GAPDHP04406 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC11.37□□□□□ -0.59
GAPDHP04406 CEACAM20-201ENST00000611497 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
GAPDHP04406 Z98885.3-201ENST00000624882 1757 ntBASIC11.37□□□□□ -0.59
GAPDHP04406 MISP-201ENST00000215582 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
GAPDHP04406 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
GAPDHP04406 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
GAPDHP04406 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
GAPDHP04406 UBA3-201ENST00000349511 2112 ntAPPRIS ALT1 TSL 2 BASIC11.37□□□□□ -0.59
GAPDHP04406 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
GAPDHP04406 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
GAPDHP04406 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC11.37□□□□□ -0.59
GAPDHP04406 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
GAPDHP04406 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC11.37□□□□□ -0.59
GAPDHP04406 DUTP3-201ENST00000450025 415 ntBASIC11.37□□□□□ -0.59
GAPDHP04406 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC11.37□□□□□ -0.59
GAPDHP04406 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
GAPDHP04406 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC11.37□□□□□ -0.59
GAPDHP04406 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC11.37□□□□□ -0.59
GAPDHP04406 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
GAPDHP04406 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC11.37□□□□□ -0.59
GAPDHP04406 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC11.37□□□□□ -0.59
GAPDHP04406 MEG3_2.1-201ENST00000611456 105 ntBASIC11.37□□□□□ -0.59
GAPDHP04406 CU633904.3-201ENST00000624042 1029 ntBASIC11.37□□□□□ -0.59
GAPDHP04406 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC11.37□□□□□ -0.59
GAPDHP04406 SPINT1-201ENST00000344051 3056 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
GAPDHP04406 APLP2-202ENST00000278756 3687 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
GAPDHP04406 FMO6P-201ENST00000236166 1620 ntBASIC11.37□□□□□ -0.59
GAPDHP04406 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
GAPDHP04406 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC11.37□□□□□ -0.59
GAPDHP04406 NLRP2-202ENST00000339757 3422 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
GAPDHP04406 NLRC3-202ENST00000359128 6401 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
GAPDHP04406 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
GAPDHP04406 LGR5-202ENST00000536515 2664 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
GAPDHP04406 SIRPA-204ENST00000622179 4570 ntAPPRIS ALT1 TSL 5 BASIC11.37□□□□□ -0.59
GAPDHP04406 AC091181.1-201ENST00000623762 2098 ntBASIC11.37□□□□□ -0.59
GAPDHP04406 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
GAPDHP04406 AL354861.3-201ENST00000600140 2412 ntBASIC11.37□□□□□ -0.59
GAPDHP04406 BCL2L11-217ENST00000610735 5120 ntTSL 5 BASIC11.37□□□□□ -0.59
GAPDHP04406 POPDC2-208ENST00000493094 1837 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
GAPDHP04406 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC11.37□□□□□ -0.59
GAPDHP04406 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
GAPDHP04406 ABLIM3-203ENST00000356541 2290 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
GAPDHP04406 ABLIM3-211ENST00000517451 2287 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
GAPDHP04406 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
GAPDHP04406 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
GAPDHP04406 ENG-201ENST00000344849 3059 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
GAPDHP04406 SPHK2-208ENST00000599029 3085 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
GAPDHP04406 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
GAPDHP04406 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
GAPDHP04406 MDH2-204ENST00000443006 2020 ntTSL 2 BASIC11.36□□□□□ -0.59
GAPDHP04406 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
GAPDHP04406 IL9RP3-201ENST00000442856 1674 ntBASIC11.36□□□□□ -0.59
GAPDHP04406 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
GAPDHP04406 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
GAPDHP04406 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
GAPDHP04406 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC11.36□□□□□ -0.59
GAPDHP04406 AC008040.5-201ENST00000599781 1781 ntBASIC11.36□□□□□ -0.59
GAPDHP04406 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
GAPDHP04406 ACER1-201ENST00000301452 1445 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
GAPDHP04406 KRT8P31-201ENST00000504812 1408 ntBASIC11.36□□□□□ -0.59
GAPDHP04406 GZF1-202ENST00000377051 4740 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
GAPDHP04406 YY1AP1-205ENST00000355499 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
GAPDHP04406 ESYT1-202ENST00000394048 4388 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
GAPDHP04406 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC11.36□□□□□ -0.59
GAPDHP04406 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
GAPDHP04406 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
GAPDHP04406 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
GAPDHP04406 DDX11-223ENST00000542838 3079 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
GAPDHP04406 MCM7-213ENST00000621318 3084 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
GAPDHP04406 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
GAPDHP04406 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
GAPDHP04406 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
GAPDHP04406 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
GAPDHP04406 AGAP3-205ENST00000463381 2730 ntTSL 2 BASIC11.36□□□□□ -0.59
GAPDHP04406 RBM15-204ENST00000617047 3284 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
GAPDHP04406 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
GAPDHP04406 MANEA-AS1-201ENST00000564541 2268 ntBASIC11.36□□□□□ -0.59
GAPDHP04406 TSC22D1-203ENST00000458659 4820 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
GAPDHP04406 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
GAPDHP04406 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
GAPDHP04406 SAT1-201ENST00000379251 801 ntTSL 2 BASIC11.36□□□□□ -0.59
GAPDHP04406 SAT1-202ENST00000379253 909 ntTSL 2 BASIC11.36□□□□□ -0.59
GAPDHP04406 SAT1-203ENST00000379254 868 ntTSL 3 BASIC11.36□□□□□ -0.59
GAPDHP04406 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
GAPDHP04406 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
GAPDHP04406 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
GAPDHP04406 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms