Protein–RNA interactions for Protein: A6NCE7

MAP1LC3B2, Microtubule-associated proteins 1A/1B light chain 3 beta 2, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B2A6NCE7 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
MAP1LC3B2A6NCE7 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
MAP1LC3B2A6NCE7 HLA-DRB6-201ENST00000411500 1235 ntBASIC10.7□□□□□ -0.7
MAP1LC3B2A6NCE7 AC087499.6-201ENST00000411576 835 ntBASIC10.7□□□□□ -0.7
MAP1LC3B2A6NCE7 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
MAP1LC3B2A6NCE7 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
MAP1LC3B2A6NCE7 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC10.7□□□□□ -0.7
MAP1LC3B2A6NCE7 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC10.7□□□□□ -0.7
MAP1LC3B2A6NCE7 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC10.7□□□□□ -0.7
MAP1LC3B2A6NCE7 AC007279.1-201ENST00000448547 837 ntBASIC10.7□□□□□ -0.7
MAP1LC3B2A6NCE7 AC004967.1-201ENST00000453589 447 ntBASIC10.7□□□□□ -0.7
MAP1LC3B2A6NCE7 BX284668.4-201ENST00000453917 508 ntBASIC10.7□□□□□ -0.7
MAP1LC3B2A6NCE7 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC10.7□□□□□ -0.7
MAP1LC3B2A6NCE7 AC006122.1-201ENST00000493323 440 ntBASIC10.7□□□□□ -0.7
MAP1LC3B2A6NCE7 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC10.7□□□□□ -0.7
MAP1LC3B2A6NCE7 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC10.7□□□□□ -0.7
MAP1LC3B2A6NCE7 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC10.7□□□□□ -0.7
MAP1LC3B2A6NCE7 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC10.7□□□□□ -0.7
MAP1LC3B2A6NCE7 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC10.7□□□□□ -0.7
MAP1LC3B2A6NCE7 TP53-221ENST00000615910 1149 ntTSL 5 BASIC10.7□□□□□ -0.7
MAP1LC3B2A6NCE7 RAB3IP-201ENST00000247833 3690 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
MAP1LC3B2A6NCE7 DAXX-203ENST00000414083 2355 ntTSL 2 BASIC10.7□□□□□ -0.7
MAP1LC3B2A6NCE7 SYNPO-202ENST00000394243 7063 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
MAP1LC3B2A6NCE7 PDHA1-213ENST00000545074 3391 ntAPPRIS ALT1 TSL 2 BASIC10.7□□□□□ -0.7
MAP1LC3B2A6NCE7 DSP-202ENST00000418664 7812 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
MAP1LC3B2A6NCE7 HDAC2-205ENST00000519065 9874 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
MAP1LC3B2A6NCE7 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC10.7□□□□□ -0.7
MAP1LC3B2A6NCE7 SPCS1-206ENST00000619898 4254 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
MAP1LC3B2A6NCE7 LIN54-201ENST00000340417 6127 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
MAP1LC3B2A6NCE7 AC243964.3-201ENST00000623022 2028 ntBASIC10.7□□□□□ -0.7
MAP1LC3B2A6NCE7 F2R-201ENST00000319211 3821 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
MAP1LC3B2A6NCE7 DNM3-208ENST00000627582 7625 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
MAP1LC3B2A6NCE7 C12orf74-201ENST00000397833 1856 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
MAP1LC3B2A6NCE7 PSG8-AS1-201ENST00000425668 1873 ntTSL 2 BASIC10.7□□□□□ -0.7
MAP1LC3B2A6NCE7 ZNF341-201ENST00000342427 3661 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
MAP1LC3B2A6NCE7 TNS2-204ENST00000546602 4429 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
MAP1LC3B2A6NCE7 NT5E-201ENST00000257770 3548 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
MAP1LC3B2A6NCE7 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC10.69□□□□□ -0.7
MAP1LC3B2A6NCE7 AC144522.1-201ENST00000625111 1658 ntBASIC10.69□□□□□ -0.7
MAP1LC3B2A6NCE7 FOSB-203ENST00000443841 3346 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
MAP1LC3B2A6NCE7 SMCR8-201ENST00000406438 8279 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
MAP1LC3B2A6NCE7 MADD-209ENST00000406482 5614 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
MAP1LC3B2A6NCE7 RPL23A-204ENST00000422514 1562 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
MAP1LC3B2A6NCE7 INTS8-217ENST00000523731 4633 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
MAP1LC3B2A6NCE7 ZNF501-201ENST00000396048 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
MAP1LC3B2A6NCE7 TMBIM6-227ENST00000552699 2964 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
MAP1LC3B2A6NCE7 ERI2-208ENST00000564349 3657 ntTSL 2 BASIC10.69□□□□□ -0.7
MAP1LC3B2A6NCE7 SEMA6D-206ENST00000389428 5874 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
MAP1LC3B2A6NCE7 ABCF2-201ENST00000222388 2185 ntTSL 5 BASIC10.69□□□□□ -0.7
MAP1LC3B2A6NCE7 PACRG-AS1-201ENST00000626335 2192 ntTSL 2 BASIC10.69□□□□□ -0.7
MAP1LC3B2A6NCE7 NOSTRIN-203ENST00000397209 1437 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
MAP1LC3B2A6NCE7 PPP1CB-201ENST00000296122 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
MAP1LC3B2A6NCE7 MPP4-204ENST00000409143 2082 ntTSL 2 BASIC10.69□□□□□ -0.7
MAP1LC3B2A6NCE7 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
MAP1LC3B2A6NCE7 C17orf53-202ENST00000319977 2725 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
MAP1LC3B2A6NCE7 TSPEAR-204ENST00000614657 4027 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
MAP1LC3B2A6NCE7 HNRNPF-202ENST00000356053 2670 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
MAP1LC3B2A6NCE7 PISD-202ENST00000382151 2669 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
MAP1LC3B2A6NCE7 HNRNPF-207ENST00000544000 2676 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
MAP1LC3B2A6NCE7 ASPH-203ENST00000379454 5268 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
MAP1LC3B2A6NCE7 ARL4A-203ENST00000396663 3212 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
MAP1LC3B2A6NCE7 UBOX5-202ENST00000348031 4469 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
MAP1LC3B2A6NCE7 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC10.69□□□□□ -0.7
MAP1LC3B2A6NCE7 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
MAP1LC3B2A6NCE7 KRT18P36-201ENST00000411618 1276 ntBASIC10.69□□□□□ -0.7
MAP1LC3B2A6NCE7 USB1-202ENST00000423271 1217 ntTSL 2 BASIC10.69□□□□□ -0.7
MAP1LC3B2A6NCE7 AL118511.1-201ENST00000439341 794 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
MAP1LC3B2A6NCE7 TDH-203ENST00000531764 1110 ntBASIC10.69□□□□□ -0.7
MAP1LC3B2A6NCE7 RPL28-205ENST00000558131 444 ntTSL 5 BASIC10.69□□□□□ -0.7
MAP1LC3B2A6NCE7 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC10.69□□□□□ -0.7
MAP1LC3B2A6NCE7 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC10.69□□□□□ -0.7
MAP1LC3B2A6NCE7 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC10.69□□□□□ -0.7
MAP1LC3B2A6NCE7 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC10.69□□□□□ -0.7
MAP1LC3B2A6NCE7 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC10.69□□□□□ -0.7
MAP1LC3B2A6NCE7 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC10.69□□□□□ -0.7
MAP1LC3B2A6NCE7 WFDC1-204ENST00000613603 549 ntBASIC10.69□□□□□ -0.7
MAP1LC3B2A6NCE7 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC10.69□□□□□ -0.7
MAP1LC3B2A6NCE7 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC10.69□□□□□ -0.7
MAP1LC3B2A6NCE7 ADD1-207ENST00000446856 3745 ntTSL 5 BASIC10.69□□□□□ -0.7
MAP1LC3B2A6NCE7 MKL1-212ENST00000618417 1842 ntTSL 5 BASIC10.69□□□□□ -0.7
MAP1LC3B2A6NCE7 CACNA1F-201ENST00000323022 6037 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
MAP1LC3B2A6NCE7 NFE2L1-203ENST00000362042 4774 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
MAP1LC3B2A6NCE7 EPB41L4A-201ENST00000261486 4707 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
MAP1LC3B2A6NCE7 HMGB1-202ENST00000339872 2319 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
MAP1LC3B2A6NCE7 IGF2BP2-204ENST00000457616 3426 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
MAP1LC3B2A6NCE7 AL358933.1-201ENST00000565046 2830 ntBASIC10.69□□□□□ -0.7
MAP1LC3B2A6NCE7 DPAGT1-201ENST00000354202 2205 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
MAP1LC3B2A6NCE7 EHD1-213ENST00000621096 3336 ntTSL 5 BASIC10.69□□□□□ -0.7
MAP1LC3B2A6NCE7 C3orf20-202ENST00000412910 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
MAP1LC3B2A6NCE7 CACNA1G-204ENST00000359106 7648 ntAPPRIS P4 TSL 1 (best) BASIC10.69□□□□□ -0.7
MAP1LC3B2A6NCE7 ENO2-209ENST00000538763 1646 ntTSL 5 BASIC10.69□□□□□ -0.7
MAP1LC3B2A6NCE7 HERC6-201ENST00000264346 3779 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
MAP1LC3B2A6NCE7 AC011511.5-201ENST00000589379 3219 ntBASIC10.69□□□□□ -0.7
MAP1LC3B2A6NCE7 TIAF1-201ENST00000359450 5337 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
MAP1LC3B2A6NCE7 MTMR3-202ENST00000333027 8906 ntTSL 5 BASIC10.69□□□□□ -0.7
MAP1LC3B2A6NCE7 ERG-211ENST00000453032 1595 ntTSL 2 BASIC10.69□□□□□ -0.7
MAP1LC3B2A6NCE7 CPA5-208ENST00000485477 2573 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
MAP1LC3B2A6NCE7 RAB6A-202ENST00000336083 3085 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
MAP1LC3B2A6NCE7 CDK16-201ENST00000276052 3016 ntTSL 2 BASIC10.68□□□□□ -0.7
MAP1LC3B2A6NCE7 NECTIN2-201ENST00000252483 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms