Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NCDNQ9UBB6 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NCDNQ9UBB6 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NCDNQ9UBB6 MST1P2-201ENST00000457982 2291 ntBASIC13.37□□□□□ -0.27
NCDNQ9UBB6 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NCDNQ9UBB6 TP73-207ENST00000378290 1831 ntTSL 2 BASIC13.37□□□□□ -0.27
NCDNQ9UBB6 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NCDNQ9UBB6 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.37□□□□□ -0.27
NCDNQ9UBB6 LINC01137-201ENST00000424989 1395 ntTSL 2 BASIC13.37□□□□□ -0.27
NCDNQ9UBB6 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NCDNQ9UBB6 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
NCDNQ9UBB6 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NCDNQ9UBB6 AC011474.4-201ENST00000623523 2076 ntBASIC13.37□□□□□ -0.27
NCDNQ9UBB6 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NCDNQ9UBB6 FTLP3-201ENST00000427242 528 ntBASIC13.37□□□□□ -0.27
NCDNQ9UBB6 AC012513.2-201ENST00000441511 1137 ntBASIC13.37□□□□□ -0.27
NCDNQ9UBB6 RN7SL148P-201ENST00000467120 279 ntBASIC13.37□□□□□ -0.27
NCDNQ9UBB6 RN7SL487P-201ENST00000468140 344 ntBASIC13.37□□□□□ -0.27
NCDNQ9UBB6 IGKV3-11-201ENST00000483158 392 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
NCDNQ9UBB6 AC114812.4-201ENST00000506676 757 ntBASIC13.37□□□□□ -0.27
NCDNQ9UBB6 PDPN-208ENST00000509009 571 ntTSL 4 BASIC13.37□□□□□ -0.27
NCDNQ9UBB6 AC008808.2-201ENST00000510349 569 ntTSL 3 BASIC13.37□□□□□ -0.27
NCDNQ9UBB6 RPL10P8-201ENST00000522888 313 ntBASIC13.37□□□□□ -0.27
NCDNQ9UBB6 KCNE3-202ENST00000525550 935 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NCDNQ9UBB6 AP001102.1-201ENST00000528959 409 ntBASIC13.37□□□□□ -0.27
NCDNQ9UBB6 PDCD2-205ENST00000537445 1114 ntTSL 3 BASIC13.37□□□□□ -0.27
NCDNQ9UBB6 AC078878.2-201ENST00000543451 286 ntTSL 5 BASIC13.37□□□□□ -0.27
NCDNQ9UBB6 AC078923.1-201ENST00000552856 748 ntTSL 3 BASIC13.37□□□□□ -0.27
NCDNQ9UBB6 AC092634.5-206ENST00000593670 812 ntTSL 5 BASIC13.37□□□□□ -0.27
NCDNQ9UBB6 AC010335.3-201ENST00000623767 531 ntBASIC13.37□□□□□ -0.27
NCDNQ9UBB6 AC093495.1-215ENST00000626655 821 ntTSL 5 BASIC13.37□□□□□ -0.27
NCDNQ9UBB6 SNORA50D-202ENST00000627561 132 ntBASIC13.37□□□□□ -0.27
NCDNQ9UBB6 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.37□□□□□ -0.27
NCDNQ9UBB6 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NCDNQ9UBB6 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NCDNQ9UBB6 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NCDNQ9UBB6 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.37□□□□□ -0.27
NCDNQ9UBB6 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NCDNQ9UBB6 AC131212.3-201ENST00000624087 4219 ntBASIC13.37□□□□□ -0.27
NCDNQ9UBB6 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
NCDNQ9UBB6 GOSR2-209ENST00000575949 1444 ntTSL 2 BASIC13.37□□□□□ -0.27
NCDNQ9UBB6 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC13.37□□□□□ -0.27
NCDNQ9UBB6 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NCDNQ9UBB6 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NCDNQ9UBB6 ZSCAN21-203ENST00000456748 1904 ntTSL 5 BASIC13.37□□□□□ -0.27
NCDNQ9UBB6 TAGLN3-205ENST00000478951 1301 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NCDNQ9UBB6 AC124944.3-201ENST00000607976 1304 ntBASIC13.37□□□□□ -0.27
NCDNQ9UBB6 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.37□□□□□ -0.27
NCDNQ9UBB6 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NCDNQ9UBB6 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.36□□□□□ -0.27
NCDNQ9UBB6 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
NCDNQ9UBB6 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NCDNQ9UBB6 DDC-204ENST00000426377 1700 ntTSL 3 BASIC13.36□□□□□ -0.27
NCDNQ9UBB6 ASMT-203ENST00000381241 1388 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NCDNQ9UBB6 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NCDNQ9UBB6 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NCDNQ9UBB6 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NCDNQ9UBB6 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.36□□□□□ -0.27
NCDNQ9UBB6 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NCDNQ9UBB6 MIR100HG-219ENST00000533109 1794 ntTSL 5 BASIC13.36□□□□□ -0.27
NCDNQ9UBB6 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NCDNQ9UBB6 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
NCDNQ9UBB6 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NCDNQ9UBB6 RBP4-203ENST00000371469 814 ntTSL 5 BASIC13.36□□□□□ -0.27
NCDNQ9UBB6 PLA2G2A-201ENST00000375111 970 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NCDNQ9UBB6 IGFL4-201ENST00000377697 573 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
NCDNQ9UBB6 LINC02036-201ENST00000415869 910 ntTSL 3 BASIC13.36□□□□□ -0.27
NCDNQ9UBB6 AC246787.2-202ENST00000418566 370 ntTSL 3 BASIC13.36□□□□□ -0.27
NCDNQ9UBB6 LINC01494-201ENST00000419511 1011 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NCDNQ9UBB6 AL512328.1-203ENST00000428480 673 ntTSL 5 BASIC13.36□□□□□ -0.27
NCDNQ9UBB6 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC13.36□□□□□ -0.27
NCDNQ9UBB6 LRRC75A-AS1-208ENST00000480811 968 ntTSL 2 BASIC13.36□□□□□ -0.27
NCDNQ9UBB6 CXXC1P1-202ENST00000489409 1212 ntBASIC13.36□□□□□ -0.27
NCDNQ9UBB6 SMIM14-205ENST00000511809 830 ntTSL 2 BASIC13.36□□□□□ -0.27
NCDNQ9UBB6 AACSP1-202ENST00000521412 1095 ntBASIC13.36□□□□□ -0.27
NCDNQ9UBB6 AC090589.3-201ENST00000524412 574 ntTSL 5 BASIC13.36□□□□□ -0.27
NCDNQ9UBB6 HAX1-211ENST00000532105 771 ntTSL 3 BASIC13.36□□□□□ -0.27
NCDNQ9UBB6 AC079601.2-201ENST00000547729 775 ntBASIC13.36□□□□□ -0.27
NCDNQ9UBB6 AC025259.1-201ENST00000550301 647 ntTSL 3 BASIC13.36□□□□□ -0.27
NCDNQ9UBB6 OSGIN1-206ENST00000565123 833 ntTSL 2 BASIC13.36□□□□□ -0.27
NCDNQ9UBB6 LINC00514-203ENST00000573465 313 ntTSL 5 BASIC13.36□□□□□ -0.27
NCDNQ9UBB6 AC010319.4-201ENST00000593957 691 ntTSL 3 BASIC13.36□□□□□ -0.27
NCDNQ9UBB6 FAM223B-202ENST00000598177 713 ntBASIC13.36□□□□□ -0.27
NCDNQ9UBB6 AC063977.2-201ENST00000601996 421 ntBASIC13.36□□□□□ -0.27
NCDNQ9UBB6 AC136475.9-201ENST00000605240 497 ntBASIC13.36□□□□□ -0.27
NCDNQ9UBB6 BCAS4-206ENST00000609336 787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
NCDNQ9UBB6 FAM223A-202ENST00000625204 713 ntBASIC13.36□□□□□ -0.27
NCDNQ9UBB6 CDIPT-AS1-203ENST00000638164 713 ntBASIC13.36□□□□□ -0.27
NCDNQ9UBB6 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
NCDNQ9UBB6 USP39-220ENST00000613444 2161 ntTSL 2 BASIC13.36□□□□□ -0.27
NCDNQ9UBB6 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
NCDNQ9UBB6 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
NCDNQ9UBB6 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
NCDNQ9UBB6 PIN4-203ENST00000373669 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NCDNQ9UBB6 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
NCDNQ9UBB6 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
NCDNQ9UBB6 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NCDNQ9UBB6 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC13.36□□□□□ -0.27
NCDNQ9UBB6 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
NCDNQ9UBB6 APEX1-201ENST00000216714 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 210.3 ms