Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
HMG20BQ9P0W2 MTHFD2P7-201ENST00000483867 983 ntBASIC16.37■□□□□ 0.21
HMG20BQ9P0W2 AK2-208ENST00000487289 920 ntTSL 2 BASIC16.37■□□□□ 0.21
HMG20BQ9P0W2 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC16.37■□□□□ 0.21
HMG20BQ9P0W2 SRPK2P-201ENST00000523408 1100 ntBASIC16.37■□□□□ 0.21
HMG20BQ9P0W2 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC16.37■□□□□ 0.21
HMG20BQ9P0W2 AP003071.1-201ENST00000567925 622 ntTSL 3 BASIC16.37■□□□□ 0.21
HMG20BQ9P0W2 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HMG20BQ9P0W2 APOC1-209ENST00000592885 562 ntTSL 3 BASIC16.37■□□□□ 0.21
HMG20BQ9P0W2 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC16.37■□□□□ 0.21
HMG20BQ9P0W2 Metazoa_SRP.153-201ENST00000620153 341 ntBASIC16.37■□□□□ 0.21
HMG20BQ9P0W2 AC010531.8-201ENST00000623341 685 ntBASIC16.37■□□□□ 0.21
HMG20BQ9P0W2 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
HMG20BQ9P0W2 PROZ-201ENST00000342783 1551 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
HMG20BQ9P0W2 AADACL4-201ENST00000376221 1575 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
HMG20BQ9P0W2 PTN-202ENST00000393083 1599 ntTSL 5 BASIC16.37■□□□□ 0.21
HMG20BQ9P0W2 POM121L14P-201ENST00000406100 1558 ntBASIC16.37■□□□□ 0.21
HMG20BQ9P0W2 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HMG20BQ9P0W2 ADAMTS7P1-201ENST00000613213 4793 ntBASIC16.37■□□□□ 0.21
HMG20BQ9P0W2 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HMG20BQ9P0W2 PCDHA6-201ENST00000378126 3267 ntBASIC16.37■□□□□ 0.21
HMG20BQ9P0W2 ZSCAN21-203ENST00000456748 1904 ntTSL 5 BASIC16.37■□□□□ 0.21
HMG20BQ9P0W2 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HMG20BQ9P0W2 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC16.37■□□□□ 0.21
HMG20BQ9P0W2 ALG8-202ENST00000376156 1677 ntTSL 2 BASIC16.37■□□□□ 0.21
HMG20BQ9P0W2 ZNF436-AS1-201ENST00000335648 2547 ntBASIC16.37■□□□□ 0.21
HMG20BQ9P0W2 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HMG20BQ9P0W2 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
HMG20BQ9P0W2 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC16.36■□□□□ 0.21
HMG20BQ9P0W2 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
HMG20BQ9P0W2 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HMG20BQ9P0W2 LINC00967-203ENST00000518035 1502 ntTSL 2 BASIC16.36■□□□□ 0.21
HMG20BQ9P0W2 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HMG20BQ9P0W2 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HMG20BQ9P0W2 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HMG20BQ9P0W2 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HMG20BQ9P0W2 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HMG20BQ9P0W2 ACOT6-201ENST00000381139 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HMG20BQ9P0W2 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
HMG20BQ9P0W2 PGAM1P11-201ENST00000416729 680 ntBASIC16.36■□□□□ 0.21
HMG20BQ9P0W2 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC16.36■□□□□ 0.21
HMG20BQ9P0W2 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC16.36■□□□□ 0.21
HMG20BQ9P0W2 CD37-203ENST00000426897 1204 ntTSL 2 BASIC16.36■□□□□ 0.21
HMG20BQ9P0W2 HLA-DPA2-205ENST00000433582 733 ntBASIC16.36■□□□□ 0.21
HMG20BQ9P0W2 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC16.36■□□□□ 0.21
HMG20BQ9P0W2 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC16.36■□□□□ 0.21
HMG20BQ9P0W2 GOLGA6L16P-201ENST00000441780 1299 ntBASIC16.36■□□□□ 0.21
HMG20BQ9P0W2 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC16.36■□□□□ 0.21
HMG20BQ9P0W2 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
HMG20BQ9P0W2 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HMG20BQ9P0W2 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
HMG20BQ9P0W2 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC16.36■□□□□ 0.21
HMG20BQ9P0W2 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HMG20BQ9P0W2 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
HMG20BQ9P0W2 FARS2-201ENST00000274680 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HMG20BQ9P0W2 RBM4-201ENST00000310092 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HMG20BQ9P0W2 GABRR2-201ENST00000402938 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HMG20BQ9P0W2 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC16.36■□□□□ 0.21
HMG20BQ9P0W2 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
HMG20BQ9P0W2 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
HMG20BQ9P0W2 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HMG20BQ9P0W2 ITGB1BP1-201ENST00000238091 1772 ntTSL 3 BASIC16.36■□□□□ 0.21
HMG20BQ9P0W2 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC16.36■□□□□ 0.21
HMG20BQ9P0W2 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
HMG20BQ9P0W2 AL445209.1-201ENST00000607269 3491 ntBASIC16.35■□□□□ 0.21
HMG20BQ9P0W2 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HMG20BQ9P0W2 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HMG20BQ9P0W2 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
HMG20BQ9P0W2 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
HMG20BQ9P0W2 HNRNPL-210ENST00000600873 1633 ntTSL 5 BASIC16.35■□□□□ 0.21
HMG20BQ9P0W2 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HMG20BQ9P0W2 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC16.35■□□□□ 0.21
HMG20BQ9P0W2 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HMG20BQ9P0W2 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC16.35■□□□□ 0.21
HMG20BQ9P0W2 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HMG20BQ9P0W2 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
HMG20BQ9P0W2 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HMG20BQ9P0W2 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
HMG20BQ9P0W2 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HMG20BQ9P0W2 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC16.35■□□□□ 0.21
HMG20BQ9P0W2 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
HMG20BQ9P0W2 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC16.35■□□□□ 0.21
HMG20BQ9P0W2 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC16.35■□□□□ 0.21
HMG20BQ9P0W2 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC16.35■□□□□ 0.21
HMG20BQ9P0W2 LINC00700-202ENST00000438372 777 ntTSL 5 BASIC16.35■□□□□ 0.21
HMG20BQ9P0W2 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HMG20BQ9P0W2 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC16.35■□□□□ 0.21
HMG20BQ9P0W2 CISD2-202ENST00000503643 808 ntTSL 2 BASIC16.35■□□□□ 0.21
HMG20BQ9P0W2 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC16.35■□□□□ 0.21
HMG20BQ9P0W2 RNA5SP420-201ENST00000516997 137 ntBASIC16.35■□□□□ 0.21
HMG20BQ9P0W2 CASP3-205ENST00000517513 964 ntTSL 5 BASIC16.35■□□□□ 0.21
HMG20BQ9P0W2 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC16.35■□□□□ 0.21
HMG20BQ9P0W2 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC16.35■□□□□ 0.21
HMG20BQ9P0W2 RN7SL605P-201ENST00000577229 281 ntBASIC16.35■□□□□ 0.21
HMG20BQ9P0W2 LINC01836-201ENST00000586061 829 ntTSL 3 BASIC16.35■□□□□ 0.21
HMG20BQ9P0W2 AC003070.1-201ENST00000592389 457 ntTSL 2 BASIC16.35■□□□□ 0.21
HMG20BQ9P0W2 MEP1AP1-201ENST00000636082 1097 ntBASIC16.35■□□□□ 0.21
HMG20BQ9P0W2 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HMG20BQ9P0W2 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HMG20BQ9P0W2 GDA-203ENST00000376986 1771 ntTSL 2 BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms