Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC11.91□□□□□ -0.5
NPIPB4C9JG80 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC11.91□□□□□ -0.5
NPIPB4C9JG80 GRP-202ENST00000420468 579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
NPIPB4C9JG80 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
NPIPB4C9JG80 LINC00700-202ENST00000438372 777 ntTSL 5 BASIC11.91□□□□□ -0.5
NPIPB4C9JG80 FGFR3P1-201ENST00000449999 601 ntBASIC11.91□□□□□ -0.5
NPIPB4C9JG80 AC114781.1-201ENST00000450559 1028 ntBASIC11.91□□□□□ -0.5
NPIPB4C9JG80 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC11.91□□□□□ -0.5
NPIPB4C9JG80 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
NPIPB4C9JG80 FAM114A2-211ENST00000520667 2121 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NPIPB4C9JG80 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
NPIPB4C9JG80 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC11.91□□□□□ -0.5
NPIPB4C9JG80 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC11.91□□□□□ -0.5
NPIPB4C9JG80 MIR3180-2-201ENST00000581748 88 ntBASIC11.91□□□□□ -0.5
NPIPB4C9JG80 RHOH-219ENST00000614836 2114 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
NPIPB4C9JG80 AL353726.2-201ENST00000623259 884 ntBASIC11.91□□□□□ -0.5
NPIPB4C9JG80 DUX4L33-201ENST00000635217 958 ntBASIC11.91□□□□□ -0.5
NPIPB4C9JG80 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
NPIPB4C9JG80 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NPIPB4C9JG80 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC11.91□□□□□ -0.5
NPIPB4C9JG80 SRP54-201ENST00000216774 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NPIPB4C9JG80 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC11.91□□□□□ -0.5
NPIPB4C9JG80 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC11.91□□□□□ -0.5
NPIPB4C9JG80 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NPIPB4C9JG80 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NPIPB4C9JG80 ACAD11-204ENST00000481970 1891 ntTSL 5 BASIC11.91□□□□□ -0.5
NPIPB4C9JG80 CES1-201ENST00000360526 2006 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
NPIPB4C9JG80 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
NPIPB4C9JG80 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC11.91□□□□□ -0.5
NPIPB4C9JG80 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NPIPB4C9JG80 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
NPIPB4C9JG80 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NPIPB4C9JG80 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
NPIPB4C9JG80 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NPIPB4C9JG80 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NPIPB4C9JG80 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NPIPB4C9JG80 CYYR1-201ENST00000299340 3101 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NPIPB4C9JG80 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
NPIPB4C9JG80 AIFM1P1-201ENST00000413342 1841 ntBASIC11.9□□□□□ -0.5
NPIPB4C9JG80 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC11.9□□□□□ -0.5
NPIPB4C9JG80 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC11.9□□□□□ -0.5
NPIPB4C9JG80 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
NPIPB4C9JG80 BCL2L1-203ENST00000376062 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
NPIPB4C9JG80 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC11.9□□□□□ -0.5
NPIPB4C9JG80 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC11.9□□□□□ -0.5
NPIPB4C9JG80 FHOD3-207ENST00000591635 3035 ntTSL 5 BASIC11.9□□□□□ -0.5
NPIPB4C9JG80 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC11.9□□□□□ -0.5
NPIPB4C9JG80 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
NPIPB4C9JG80 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC11.9□□□□□ -0.5
NPIPB4C9JG80 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
NPIPB4C9JG80 C1QTNF3-202ENST00000382065 2802 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
NPIPB4C9JG80 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
NPIPB4C9JG80 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
NPIPB4C9JG80 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
NPIPB4C9JG80 MYL7-201ENST00000223364 612 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
NPIPB4C9JG80 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
NPIPB4C9JG80 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC11.9□□□□□ -0.5
NPIPB4C9JG80 MAGEA11-202ENST00000355220 1864 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
NPIPB4C9JG80 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC11.9□□□□□ -0.5
NPIPB4C9JG80 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC11.9□□□□□ -0.5
NPIPB4C9JG80 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC11.9□□□□□ -0.5
NPIPB4C9JG80 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC11.9□□□□□ -0.5
NPIPB4C9JG80 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC11.9□□□□□ -0.5
NPIPB4C9JG80 RPL35P9-201ENST00000446059 350 ntBASIC11.9□□□□□ -0.5
NPIPB4C9JG80 VTI1BP1-201ENST00000486325 700 ntBASIC11.9□□□□□ -0.5
NPIPB4C9JG80 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC11.9□□□□□ -0.5
NPIPB4C9JG80 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC11.9□□□□□ -0.5
NPIPB4C9JG80 PRKAB1-206ENST00000541640 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
NPIPB4C9JG80 PPFIBP1-215ENST00000542629 3208 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
NPIPB4C9JG80 AC226150.1-201ENST00000544259 466 ntBASIC11.9□□□□□ -0.5
NPIPB4C9JG80 DNM1P30-201ENST00000563586 452 ntBASIC11.9□□□□□ -0.5
NPIPB4C9JG80 AC135983.4-201ENST00000564116 1262 ntBASIC11.9□□□□□ -0.5
NPIPB4C9JG80 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC11.9□□□□□ -0.5
NPIPB4C9JG80 FAM187B2P-201ENST00000577135 713 ntBASIC11.9□□□□□ -0.5
NPIPB4C9JG80 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC11.9□□□□□ -0.5
NPIPB4C9JG80 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC11.9□□□□□ -0.5
NPIPB4C9JG80 PPA1-206ENST00000625364 644 ntTSL 5 BASIC11.9□□□□□ -0.5
NPIPB4C9JG80 AL805961.1-201ENST00000642026 753 ntBASIC11.9□□□□□ -0.5
NPIPB4C9JG80 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
NPIPB4C9JG80 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
NPIPB4C9JG80 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
NPIPB4C9JG80 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
NPIPB4C9JG80 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
NPIPB4C9JG80 AOC4P-203ENST00000566825 2289 ntBASIC11.9□□□□□ -0.5
NPIPB4C9JG80 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
NPIPB4C9JG80 GLYR1-212ENST00000591451 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
NPIPB4C9JG80 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC11.9□□□□□ -0.5
NPIPB4C9JG80 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
NPIPB4C9JG80 FUCA1P1-201ENST00000374476 1351 ntBASIC11.9□□□□□ -0.5
NPIPB4C9JG80 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
NPIPB4C9JG80 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
NPIPB4C9JG80 AC010547.1-201ENST00000500612 2793 ntTSL 2 BASIC11.9□□□□□ -0.51
NPIPB4C9JG80 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC11.89□□□□□ -0.51
NPIPB4C9JG80 LILRB1-202ENST00000396315 2157 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
NPIPB4C9JG80 AC120114.4-201ENST00000623731 2194 ntBASIC11.89□□□□□ -0.51
NPIPB4C9JG80 MAGED2-207ENST00000396224 2026 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
NPIPB4C9JG80 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
NPIPB4C9JG80 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NPIPB4C9JG80 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
NPIPB4C9JG80 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms