Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SHKBP1Q8TBC3 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC14.18□□□□□ -0.14
SHKBP1Q8TBC3 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC14.18□□□□□ -0.14
SHKBP1Q8TBC3 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHKBP1Q8TBC3 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHKBP1Q8TBC3 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SHKBP1Q8TBC3 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SHKBP1Q8TBC3 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
SHKBP1Q8TBC3 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
SHKBP1Q8TBC3 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SHKBP1Q8TBC3 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SHKBP1Q8TBC3 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SHKBP1Q8TBC3 CCL19-202ENST00000378800 414 ntTSL 2 BASIC14.18□□□□□ -0.14
SHKBP1Q8TBC3 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
SHKBP1Q8TBC3 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC14.18□□□□□ -0.14
SHKBP1Q8TBC3 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC14.18□□□□□ -0.14
SHKBP1Q8TBC3 AL158207.2-201ENST00000414926 266 ntTSL 5 BASIC14.18□□□□□ -0.14
SHKBP1Q8TBC3 CORO1C-203ENST00000421578 1296 ntTSL 2 BASIC14.18□□□□□ -0.14
SHKBP1Q8TBC3 SMAD1-AS1-201ENST00000513542 481 ntTSL 2 BASIC14.18□□□□□ -0.14
SHKBP1Q8TBC3 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC14.18□□□□□ -0.14
SHKBP1Q8TBC3 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC14.18□□□□□ -0.14
SHKBP1Q8TBC3 SLC25A3-206ENST00000547534 556 ntTSL 2 BASIC14.18□□□□□ -0.14
SHKBP1Q8TBC3 KRT8P34-201ENST00000577607 1044 ntBASIC14.18□□□□□ -0.14
SHKBP1Q8TBC3 LINC01836-201ENST00000586061 829 ntTSL 3 BASIC14.18□□□□□ -0.14
SHKBP1Q8TBC3 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC14.18□□□□□ -0.14
SHKBP1Q8TBC3 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC14.18□□□□□ -0.14
SHKBP1Q8TBC3 BX322534.1-201ENST00000635574 241 ntBASIC14.18□□□□□ -0.14
SHKBP1Q8TBC3 AC215524.1-201ENST00000635696 241 ntBASIC14.18□□□□□ -0.14
SHKBP1Q8TBC3 AL590094.1-208ENST00000636917 627 ntTSL 5 BASIC14.18□□□□□ -0.14
SHKBP1Q8TBC3 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SHKBP1Q8TBC3 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC14.18□□□□□ -0.14
SHKBP1Q8TBC3 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHKBP1Q8TBC3 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHKBP1Q8TBC3 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHKBP1Q8TBC3 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC14.18□□□□□ -0.14
SHKBP1Q8TBC3 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
SHKBP1Q8TBC3 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SHKBP1Q8TBC3 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC14.18□□□□□ -0.14
SHKBP1Q8TBC3 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHKBP1Q8TBC3 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
SHKBP1Q8TBC3 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHKBP1Q8TBC3 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHKBP1Q8TBC3 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC14.18□□□□□ -0.14
SHKBP1Q8TBC3 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC14.18□□□□□ -0.14
SHKBP1Q8TBC3 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC14.18□□□□□ -0.14
SHKBP1Q8TBC3 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC14.17□□□□□ -0.14
SHKBP1Q8TBC3 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC14.17□□□□□ -0.14
SHKBP1Q8TBC3 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC14.17□□□□□ -0.14
SHKBP1Q8TBC3 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
SHKBP1Q8TBC3 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC14.17□□□□□ -0.14
SHKBP1Q8TBC3 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC14.17□□□□□ -0.14
SHKBP1Q8TBC3 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHKBP1Q8TBC3 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC14.17□□□□□ -0.14
SHKBP1Q8TBC3 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHKBP1Q8TBC3 KRT8P38-201ENST00000441370 1430 ntBASIC14.17□□□□□ -0.14
SHKBP1Q8TBC3 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC14.17□□□□□ -0.14
SHKBP1Q8TBC3 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC14.17□□□□□ -0.14
SHKBP1Q8TBC3 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC14.17□□□□□ -0.14
SHKBP1Q8TBC3 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC14.17□□□□□ -0.14
SHKBP1Q8TBC3 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHKBP1Q8TBC3 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
SHKBP1Q8TBC3 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SHKBP1Q8TBC3 PHBP10-201ENST00000416467 784 ntBASIC14.17□□□□□ -0.14
SHKBP1Q8TBC3 AC136604.1-202ENST00000425471 771 ntBASIC14.17□□□□□ -0.14
SHKBP1Q8TBC3 UBE2D3-221ENST00000507845 577 ntTSL 4 BASIC14.17□□□□□ -0.14
SHKBP1Q8TBC3 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC14.17□□□□□ -0.14
SHKBP1Q8TBC3 AC091304.3-201ENST00000566500 716 ntBASIC14.17□□□□□ -0.14
SHKBP1Q8TBC3 LINC01996-201ENST00000573270 1273 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SHKBP1Q8TBC3 RN7SL121P-201ENST00000584223 273 ntBASIC14.17□□□□□ -0.14
SHKBP1Q8TBC3 AC068675.1-201ENST00000588996 561 ntTSL 4 BASIC14.17□□□□□ -0.14
SHKBP1Q8TBC3 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC14.17□□□□□ -0.14
SHKBP1Q8TBC3 GSTT2-203ENST00000634759 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHKBP1Q8TBC3 PAX6-237ENST00000638696 1203 ntTSL 5 BASIC14.17□□□□□ -0.14
SHKBP1Q8TBC3 AL513497.1-201ENST00000624273 2083 ntBASIC14.17□□□□□ -0.14
SHKBP1Q8TBC3 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHKBP1Q8TBC3 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC14.17□□□□□ -0.14
SHKBP1Q8TBC3 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC14.17□□□□□ -0.14
SHKBP1Q8TBC3 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.17□□□□□ -0.14
SHKBP1Q8TBC3 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHKBP1Q8TBC3 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
SHKBP1Q8TBC3 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHKBP1Q8TBC3 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
SHKBP1Q8TBC3 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHKBP1Q8TBC3 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHKBP1Q8TBC3 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHKBP1Q8TBC3 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SHKBP1Q8TBC3 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC14.16□□□□□ -0.14
SHKBP1Q8TBC3 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC14.16□□□□□ -0.14
SHKBP1Q8TBC3 CICP1-201ENST00000416803 2410 ntBASIC14.16□□□□□ -0.14
SHKBP1Q8TBC3 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHKBP1Q8TBC3 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC14.16□□□□□ -0.14
SHKBP1Q8TBC3 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHKBP1Q8TBC3 ZNRF4-201ENST00000222033 1426 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
SHKBP1Q8TBC3 RSPH4A-202ENST00000368580 1410 ntTSL 5 BASIC14.16□□□□□ -0.14
SHKBP1Q8TBC3 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
SHKBP1Q8TBC3 AC007431.1-201ENST00000578662 1412 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SHKBP1Q8TBC3 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
SHKBP1Q8TBC3 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHKBP1Q8TBC3 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHKBP1Q8TBC3 FUK-202ENST00000378912 3925 ntTSL 2 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms