Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 ABL2-210ENST00000511413 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
BBS1Q8NFJ9 EFHD1-203ENST00000409708 1817 ntTSL 2 BASIC12.21□□□□□ -0.45
BBS1Q8NFJ9 SEC23B-201ENST00000262544 3176 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
BBS1Q8NFJ9 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
BBS1Q8NFJ9 POMT1-203ENST00000372228 3123 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
BBS1Q8NFJ9 ITIH5-201ENST00000397145 3132 ntTSL 2 BASIC12.21□□□□□ -0.45
BBS1Q8NFJ9 TRPC7-201ENST00000352189 2241 ntTSL 5 BASIC12.21□□□□□ -0.45
BBS1Q8NFJ9 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
BBS1Q8NFJ9 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
BBS1Q8NFJ9 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
BBS1Q8NFJ9 FRMPD2B-201ENST00000431305 1347 ntBASIC12.21□□□□□ -0.45
BBS1Q8NFJ9 ENG-201ENST00000344849 3059 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
BBS1Q8NFJ9 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
BBS1Q8NFJ9 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
BBS1Q8NFJ9 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
BBS1Q8NFJ9 GGTLC4P-201ENST00000402176 664 ntBASIC12.21□□□□□ -0.45
BBS1Q8NFJ9 SERF2-206ENST00000409291 807 ntTSL 3 BASIC12.21□□□□□ -0.45
BBS1Q8NFJ9 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC12.21□□□□□ -0.45
BBS1Q8NFJ9 COQ10BP2-201ENST00000513804 724 ntBASIC12.21□□□□□ -0.45
BBS1Q8NFJ9 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC12.21□□□□□ -0.45
BBS1Q8NFJ9 AC126915.1-201ENST00000522847 1038 ntBASIC12.21□□□□□ -0.45
BBS1Q8NFJ9 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC12.21□□□□□ -0.45
BBS1Q8NFJ9 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC12.21□□□□□ -0.45
BBS1Q8NFJ9 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC12.21□□□□□ -0.45
BBS1Q8NFJ9 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
BBS1Q8NFJ9 AP001462.1-201ENST00000594089 452 ntBASIC12.21□□□□□ -0.45
BBS1Q8NFJ9 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC12.21□□□□□ -0.45
BBS1Q8NFJ9 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
BBS1Q8NFJ9 ALDOA-213ENST00000564595 1663 ntTSL 2 BASIC12.21□□□□□ -0.45
BBS1Q8NFJ9 FOSB-203ENST00000443841 3346 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
BBS1Q8NFJ9 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
BBS1Q8NFJ9 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC12.21□□□□□ -0.45
BBS1Q8NFJ9 STRA6-201ENST00000323940 2864 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
BBS1Q8NFJ9 AC022098.1-201ENST00000588387 2861 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
BBS1Q8NFJ9 SERPINA1-205ENST00000404814 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
BBS1Q8NFJ9 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
BBS1Q8NFJ9 BAIAP2L1-201ENST00000005260 3622 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
BBS1Q8NFJ9 GSTM3-201ENST00000256594 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
BBS1Q8NFJ9 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
BBS1Q8NFJ9 AC006033.2-201ENST00000609522 1968 ntTSL 2 BASIC12.21□□□□□ -0.46
BBS1Q8NFJ9 BOLL-201ENST00000282278 2742 ntTSL 2 BASIC12.21□□□□□ -0.46
BBS1Q8NFJ9 HMGB1-202ENST00000339872 2319 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
BBS1Q8NFJ9 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC12.21□□□□□ -0.46
BBS1Q8NFJ9 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
BBS1Q8NFJ9 APOBR-201ENST00000431282 3765 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
BBS1Q8NFJ9 C1RL-201ENST00000266542 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
BBS1Q8NFJ9 GLIPR2-202ENST00000377960 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
BBS1Q8NFJ9 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
BBS1Q8NFJ9 AFF2-202ENST00000342251 7313 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
BBS1Q8NFJ9 ARMCX6-201ENST00000361910 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
BBS1Q8NFJ9 AFG3L2P1-201ENST00000521792 1763 ntBASIC12.2□□□□□ -0.46
BBS1Q8NFJ9 AC090114.2-201ENST00000608477 7054 ntBASIC12.2□□□□□ -0.46
BBS1Q8NFJ9 PTK7-204ENST00000349241 3801 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
BBS1Q8NFJ9 IGSF11-202ENST00000393775 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
BBS1Q8NFJ9 DYRK4-214ENST00000543431 2068 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
BBS1Q8NFJ9 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
BBS1Q8NFJ9 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
BBS1Q8NFJ9 PDZRN3-205ENST00000466780 2737 ntTSL 2 BASIC12.2□□□□□ -0.46
BBS1Q8NFJ9 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
BBS1Q8NFJ9 DNMT3B-203ENST00000348286 4048 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
BBS1Q8NFJ9 NR4A1-201ENST00000243050 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
BBS1Q8NFJ9 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
BBS1Q8NFJ9 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
BBS1Q8NFJ9 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
BBS1Q8NFJ9 CDCA7L-201ENST00000356195 2915 ntTSL 2 BASIC12.2□□□□□ -0.46
BBS1Q8NFJ9 FAS-204ENST00000355740 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
BBS1Q8NFJ9 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
BBS1Q8NFJ9 LOXL3-204ENST00000409549 2897 ntTSL 2 BASIC12.2□□□□□ -0.46
BBS1Q8NFJ9 RPS3-201ENST00000278572 907 ntTSL 3 BASIC12.2□□□□□ -0.46
BBS1Q8NFJ9 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
BBS1Q8NFJ9 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC12.2□□□□□ -0.46
BBS1Q8NFJ9 MIR658-201ENST00000385210 100 ntBASIC12.2□□□□□ -0.46
BBS1Q8NFJ9 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
BBS1Q8NFJ9 AL627231.1-201ENST00000394467 1125 ntBASIC12.2□□□□□ -0.46
BBS1Q8NFJ9 CYP46A4P-201ENST00000414953 267 ntBASIC12.2□□□□□ -0.46
BBS1Q8NFJ9 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC12.2□□□□□ -0.46
BBS1Q8NFJ9 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
BBS1Q8NFJ9 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC12.2□□□□□ -0.46
BBS1Q8NFJ9 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC12.2□□□□□ -0.46
BBS1Q8NFJ9 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC12.2□□□□□ -0.46
BBS1Q8NFJ9 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC12.2□□□□□ -0.46
BBS1Q8NFJ9 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC12.2□□□□□ -0.46
BBS1Q8NFJ9 AC095040.1-201ENST00000513286 675 ntBASIC12.2□□□□□ -0.46
BBS1Q8NFJ9 FAM8A2P-201ENST00000528813 1142 ntBASIC12.2□□□□□ -0.46
BBS1Q8NFJ9 SYT17-208ENST00000568433 812 ntTSL 3 BASIC12.2□□□□□ -0.46
BBS1Q8NFJ9 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC12.2□□□□□ -0.46
BBS1Q8NFJ9 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC12.2□□□□□ -0.46
BBS1Q8NFJ9 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC12.2□□□□□ -0.46
BBS1Q8NFJ9 AC100757.4-201ENST00000626934 759 ntBASIC12.2□□□□□ -0.46
BBS1Q8NFJ9 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
BBS1Q8NFJ9 GRM7-201ENST00000357716 4127 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
BBS1Q8NFJ9 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
BBS1Q8NFJ9 PLA2G4E-AS1-201ENST00000499478 2499 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
BBS1Q8NFJ9 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
BBS1Q8NFJ9 MRRF-201ENST00000297908 1841 ntTSL 2 BASIC12.2□□□□□ -0.46
BBS1Q8NFJ9 MKL1-212ENST00000618417 1842 ntTSL 5 BASIC12.2□□□□□ -0.46
BBS1Q8NFJ9 COL8A1-202ENST00000273342 3029 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
BBS1Q8NFJ9 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
BBS1Q8NFJ9 MSH6-210ENST00000540021 3930 ntTSL 2 BASIC12.2□□□□□ -0.46
BBS1Q8NFJ9 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms