Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLDN20P56880 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
CLDN20P56880 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLDN20P56880 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC12.48□□□□□ -0.41
CLDN20P56880 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC12.48□□□□□ -0.41
CLDN20P56880 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC12.48□□□□□ -0.41
CLDN20P56880 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLDN20P56880 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC12.48□□□□□ -0.41
CLDN20P56880 AC008267.1-201ENST00000474858 1069 ntBASIC12.48□□□□□ -0.41
CLDN20P56880 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
CLDN20P56880 AL132994.1-201ENST00000554098 400 ntBASIC12.48□□□□□ -0.41
CLDN20P56880 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC12.48□□□□□ -0.41
CLDN20P56880 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC12.48□□□□□ -0.41
CLDN20P56880 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
CLDN20P56880 GARS-210ENST00000627489 324 ntTSL 4 BASIC12.48□□□□□ -0.41
CLDN20P56880 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLDN20P56880 TNRC18P1-201ENST00000502875 3650 ntBASIC12.48□□□□□ -0.41
CLDN20P56880 DGKA-202ENST00000394147 2770 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
CLDN20P56880 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLDN20P56880 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC12.48□□□□□ -0.41
CLDN20P56880 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLDN20P56880 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC12.48□□□□□ -0.41
CLDN20P56880 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLDN20P56880 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
CLDN20P56880 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLDN20P56880 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLDN20P56880 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLDN20P56880 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
CLDN20P56880 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLDN20P56880 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CLDN20P56880 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
CLDN20P56880 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
CLDN20P56880 PER1-202ENST00000354903 3115 ntTSL 2 BASIC12.48□□□□□ -0.41
CLDN20P56880 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC12.48□□□□□ -0.41
CLDN20P56880 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC12.48□□□□□ -0.41
CLDN20P56880 IL9RP3-201ENST00000442856 1674 ntBASIC12.48□□□□□ -0.41
CLDN20P56880 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLDN20P56880 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
CLDN20P56880 ZNF185-205ENST00000370270 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLDN20P56880 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLDN20P56880 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CLDN20P56880 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CLDN20P56880 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLDN20P56880 TRMT61A-202ENST00000389749 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLDN20P56880 MICAL1-208ENST00000630715 3678 ntTSL 2 BASIC12.47□□□□□ -0.41
CLDN20P56880 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CLDN20P56880 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CLDN20P56880 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
CLDN20P56880 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLDN20P56880 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLDN20P56880 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLDN20P56880 AC022400.8-201ENST00000623453 3599 ntBASIC12.47□□□□□ -0.41
CLDN20P56880 ZNF197-204ENST00000383745 2935 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CLDN20P56880 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLDN20P56880 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLDN20P56880 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLDN20P56880 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC12.47□□□□□ -0.41
CLDN20P56880 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
CLDN20P56880 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
CLDN20P56880 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC12.47□□□□□ -0.41
CLDN20P56880 MPRIPP1-201ENST00000452433 1089 ntBASIC12.47□□□□□ -0.41
CLDN20P56880 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC12.47□□□□□ -0.41
CLDN20P56880 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC12.47□□□□□ -0.41
CLDN20P56880 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC12.47□□□□□ -0.41
CLDN20P56880 IGHV1-12-201ENST00000518307 205 ntBASIC12.47□□□□□ -0.41
CLDN20P56880 MIR4326-201ENST00000582203 59 ntBASIC12.47□□□□□ -0.41
CLDN20P56880 MIR5572-201ENST00000583188 137 ntBASIC12.47□□□□□ -0.41
CLDN20P56880 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC12.47□□□□□ -0.41
CLDN20P56880 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC12.47□□□□□ -0.41
CLDN20P56880 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLDN20P56880 AC012073.1-201ENST00000606114 1108 ntBASIC12.47□□□□□ -0.41
CLDN20P56880 AL009176.1-201ENST00000607876 650 ntBASIC12.47□□□□□ -0.41
CLDN20P56880 AL161773.1-201ENST00000624845 863 ntBASIC12.47□□□□□ -0.41
CLDN20P56880 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CLDN20P56880 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLDN20P56880 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLDN20P56880 IGHG1-202ENST00000390548 2619 ntAPPRIS P5 BASIC12.47□□□□□ -0.41
CLDN20P56880 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CLDN20P56880 TRIM3-203ENST00000525074 3044 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
CLDN20P56880 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLDN20P56880 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC12.47□□□□□ -0.41
CLDN20P56880 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLDN20P56880 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLDN20P56880 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLDN20P56880 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLDN20P56880 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLDN20P56880 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC12.47□□□□□ -0.41
CLDN20P56880 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC12.47□□□□□ -0.41
CLDN20P56880 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
CLDN20P56880 TNFSF8-201ENST00000223795 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLDN20P56880 AC016738.1-201ENST00000452364 3485 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CLDN20P56880 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CLDN20P56880 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CLDN20P56880 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC12.46□□□□□ -0.41
CLDN20P56880 USP3-204ENST00000540797 5474 ntTSL 2 BASIC12.46□□□□□ -0.41
CLDN20P56880 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CLDN20P56880 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC12.46□□□□□ -0.41
CLDN20P56880 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
CLDN20P56880 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CLDN20P56880 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms