Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
PARPBPQ9NWS1 STK3-218ENST00000617590 2485 ntTSL 5 BASIC12.23□□□□□ -0.45
PARPBPQ9NWS1 CD38-201ENST00000226279 5668 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PARPBPQ9NWS1 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
PARPBPQ9NWS1 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
PARPBPQ9NWS1 RALGAPB-201ENST00000262879 8663 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
PARPBPQ9NWS1 RALGAPB-203ENST00000397042 8652 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PARPBPQ9NWS1 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
PARPBPQ9NWS1 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC12.23□□□□□ -0.45
PARPBPQ9NWS1 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
PARPBPQ9NWS1 ZNF621-202ENST00000339296 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PARPBPQ9NWS1 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PARPBPQ9NWS1 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PARPBPQ9NWS1 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PARPBPQ9NWS1 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC12.23□□□□□ -0.45
PARPBPQ9NWS1 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC12.23□□□□□ -0.45
PARPBPQ9NWS1 BCORL1-201ENST00000218147 6860 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
PARPBPQ9NWS1 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
PARPBPQ9NWS1 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
PARPBPQ9NWS1 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PARPBPQ9NWS1 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
PARPBPQ9NWS1 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC12.22□□□□□ -0.45
PARPBPQ9NWS1 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PARPBPQ9NWS1 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC12.22□□□□□ -0.45
PARPBPQ9NWS1 GRAMD4-201ENST00000361034 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PARPBPQ9NWS1 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC12.22□□□□□ -0.45
PARPBPQ9NWS1 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PARPBPQ9NWS1 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
PARPBPQ9NWS1 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
PARPBPQ9NWS1 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC12.22□□□□□ -0.45
PARPBPQ9NWS1 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
PARPBPQ9NWS1 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC12.22□□□□□ -0.45
PARPBPQ9NWS1 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
PARPBPQ9NWS1 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC12.22□□□□□ -0.45
PARPBPQ9NWS1 PFN2-202ENST00000423691 911 ntTSL 2 BASIC12.22□□□□□ -0.45
PARPBPQ9NWS1 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC12.22□□□□□ -0.45
PARPBPQ9NWS1 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC12.22□□□□□ -0.45
PARPBPQ9NWS1 HNRNPA1P2-207ENST00000432375 960 ntBASIC12.22□□□□□ -0.45
PARPBPQ9NWS1 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC12.22□□□□□ -0.45
PARPBPQ9NWS1 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC12.22□□□□□ -0.45
PARPBPQ9NWS1 STK24P1-201ENST00000455035 1291 ntBASIC12.22□□□□□ -0.45
PARPBPQ9NWS1 RN7SL181P-201ENST00000462921 277 ntBASIC12.22□□□□□ -0.45
PARPBPQ9NWS1 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
PARPBPQ9NWS1 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC12.22□□□□□ -0.45
PARPBPQ9NWS1 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
PARPBPQ9NWS1 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC12.22□□□□□ -0.45
PARPBPQ9NWS1 AC068867.1-201ENST00000559855 150 ntBASIC12.22□□□□□ -0.45
PARPBPQ9NWS1 AC135983.4-201ENST00000564116 1262 ntBASIC12.22□□□□□ -0.45
PARPBPQ9NWS1 RN7SL357P-201ENST00000581065 298 ntBASIC12.22□□□□□ -0.45
PARPBPQ9NWS1 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC12.22□□□□□ -0.45
PARPBPQ9NWS1 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC12.22□□□□□ -0.45
PARPBPQ9NWS1 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC12.22□□□□□ -0.45
PARPBPQ9NWS1 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC12.22□□□□□ -0.45
PARPBPQ9NWS1 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC12.22□□□□□ -0.45
PARPBPQ9NWS1 PPFIA4-201ENST00000272198 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
PARPBPQ9NWS1 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PARPBPQ9NWS1 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PARPBPQ9NWS1 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC12.22□□□□□ -0.45
PARPBPQ9NWS1 IKZF1-211ENST00000440768 5511 ntTSL 5 BASIC12.22□□□□□ -0.45
PARPBPQ9NWS1 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PARPBPQ9NWS1 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
PARPBPQ9NWS1 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
PARPBPQ9NWS1 HTR2C-201ENST00000276198 4751 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PARPBPQ9NWS1 C15orf40-201ENST00000304177 11244 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PARPBPQ9NWS1 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PARPBPQ9NWS1 XIRP1-201ENST00000340369 6460 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
PARPBPQ9NWS1 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
PARPBPQ9NWS1 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PARPBPQ9NWS1 FAM225A-202ENST00000453010 5625 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
PARPBPQ9NWS1 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
PARPBPQ9NWS1 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
PARPBPQ9NWS1 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC12.22□□□□□ -0.45
PARPBPQ9NWS1 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
PARPBPQ9NWS1 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC12.22□□□□□ -0.45
PARPBPQ9NWS1 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC12.22□□□□□ -0.45
PARPBPQ9NWS1 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
PARPBPQ9NWS1 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
PARPBPQ9NWS1 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC12.21□□□□□ -0.45
PARPBPQ9NWS1 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
PARPBPQ9NWS1 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.45
PARPBPQ9NWS1 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC12.21□□□□□ -0.45
PARPBPQ9NWS1 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
PARPBPQ9NWS1 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
PARPBPQ9NWS1 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
PARPBPQ9NWS1 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC12.21□□□□□ -0.45
PARPBPQ9NWS1 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
PARPBPQ9NWS1 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
PARPBPQ9NWS1 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
PARPBPQ9NWS1 CAD-201ENST00000264705 7265 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
PARPBPQ9NWS1 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
PARPBPQ9NWS1 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC12.21□□□□□ -0.45
PARPBPQ9NWS1 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
PARPBPQ9NWS1 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
PARPBPQ9NWS1 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
PARPBPQ9NWS1 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
PARPBPQ9NWS1 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
PARPBPQ9NWS1 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
PARPBPQ9NWS1 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
PARPBPQ9NWS1 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.45
PARPBPQ9NWS1 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms