Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
HPS1Q92902 SEPT9-207ENST00000449803 3996 ntTSL 2 BASIC12.67□□□□□ -0.38
HPS1Q92902 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HPS1Q92902 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
HPS1Q92902 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
HPS1Q92902 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC12.67□□□□□ -0.38
HPS1Q92902 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
HPS1Q92902 HJURP-204ENST00000432087 3027 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
HPS1Q92902 IST1-203ENST00000378799 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HPS1Q92902 SHPRH-202ENST00000367503 5237 ntTSL 5 BASIC12.66□□□□□ -0.38
HPS1Q92902 RNF170-206ENST00000527424 3880 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HPS1Q92902 DENND3-221ENST00000523308 2959 ntTSL 2 BASIC12.66□□□□□ -0.38
HPS1Q92902 ABCC4-206ENST00000536256 2840 ntTSL 2 BASIC12.66□□□□□ -0.38
HPS1Q92902 EPB42-202ENST00000441366 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HPS1Q92902 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HPS1Q92902 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC12.66□□□□□ -0.38
HPS1Q92902 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
HPS1Q92902 ENOX2-201ENST00000338144 4263 ntTSL 2 BASIC12.66□□□□□ -0.38
HPS1Q92902 TXLNG-202ENST00000398155 3998 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
HPS1Q92902 ALDH4A1-202ENST00000375341 3363 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HPS1Q92902 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HPS1Q92902 COX7A2L-202ENST00000378669 3056 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
HPS1Q92902 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HPS1Q92902 ZNF564-201ENST00000339282 2935 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HPS1Q92902 COG4-202ENST00000393612 2756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
HPS1Q92902 SLC5A9-203ENST00000438567 3195 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
HPS1Q92902 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HPS1Q92902 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HPS1Q92902 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC12.66□□□□□ -0.38
HPS1Q92902 C3orf20-202ENST00000412910 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
HPS1Q92902 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC12.66□□□□□ -0.38
HPS1Q92902 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HPS1Q92902 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HPS1Q92902 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HPS1Q92902 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC12.66□□□□□ -0.38
HPS1Q92902 CSH2-202ENST00000345366 598 ntTSL 5 BASIC12.66□□□□□ -0.38
HPS1Q92902 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC12.66□□□□□ -0.38
HPS1Q92902 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HPS1Q92902 CDC23-201ENST00000394884 1079 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HPS1Q92902 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HPS1Q92902 AC019070.1-201ENST00000415008 1024 ntBASIC12.66□□□□□ -0.38
HPS1Q92902 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC12.66□□□□□ -0.38
HPS1Q92902 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
HPS1Q92902 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC12.66□□□□□ -0.38
HPS1Q92902 RPSAP36-202ENST00000494591 1261 ntBASIC12.66□□□□□ -0.38
HPS1Q92902 CDC23-208ENST00000505120 455 ntTSL 3 BASIC12.66□□□□□ -0.38
HPS1Q92902 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC12.66□□□□□ -0.38
HPS1Q92902 SCARNA20.5-201ENST00000516991 142 ntBASIC12.66□□□□□ -0.38
HPS1Q92902 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC12.66□□□□□ -0.38
HPS1Q92902 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HPS1Q92902 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
HPS1Q92902 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC12.66□□□□□ -0.38
HPS1Q92902 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC12.66□□□□□ -0.38
HPS1Q92902 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
HPS1Q92902 AC244157.2-201ENST00000616239 1006 ntBASIC12.66□□□□□ -0.38
HPS1Q92902 APBB1-223ENST00000618005 2107 ntTSL 5 BASIC12.66□□□□□ -0.38
HPS1Q92902 AC009039.2-201ENST00000624524 529 ntBASIC12.66□□□□□ -0.38
HPS1Q92902 ASB2-203ENST00000555019 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HPS1Q92902 EPS15L1-201ENST00000248070 2924 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HPS1Q92902 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HPS1Q92902 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
HPS1Q92902 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HPS1Q92902 SNX33-201ENST00000308527 8008 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HPS1Q92902 SFPQ-201ENST00000357214 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HPS1Q92902 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HPS1Q92902 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC12.66□□□□□ -0.38
HPS1Q92902 LRTM2-208ENST00000543818 3986 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
HPS1Q92902 LIMCH1-213ENST00000511496 3439 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HPS1Q92902 RBM4-205ENST00000409406 2321 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
HPS1Q92902 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HPS1Q92902 OTUD6B-201ENST00000285420 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HPS1Q92902 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HPS1Q92902 PAX8-205ENST00000429538 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HPS1Q92902 NKAP-201ENST00000371410 5963 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HPS1Q92902 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HPS1Q92902 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HPS1Q92902 GRIK1-206ENST00000399913 3234 ntTSL 2 BASIC12.66□□□□□ -0.38
HPS1Q92902 ABL2-210ENST00000511413 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
HPS1Q92902 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC12.66□□□□□ -0.38
HPS1Q92902 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
HPS1Q92902 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
HPS1Q92902 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
HPS1Q92902 API5-203ENST00000455725 2257 ntTSL 2 BASIC12.65□□□□□ -0.38
HPS1Q92902 DRC7-203ENST00000394337 2906 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
HPS1Q92902 POLL-203ENST00000370162 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HPS1Q92902 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HPS1Q92902 ZFYVE19-209ENST00000564258 2059 ntTSL 2 BASIC12.65□□□□□ -0.38
HPS1Q92902 HARS-202ENST00000415192 1401 ntTSL 2 BASIC12.65□□□□□ -0.38
HPS1Q92902 SH2D3C-202ENST00000373276 3051 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
HPS1Q92902 BCDIN3D-AS1-201ENST00000548872 3078 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
HPS1Q92902 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
HPS1Q92902 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
HPS1Q92902 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC12.65□□□□□ -0.38
HPS1Q92902 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HPS1Q92902 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
HPS1Q92902 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
HPS1Q92902 KRTAP10-13P-201ENST00000412914 571 ntBASIC12.65□□□□□ -0.38
HPS1Q92902 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC12.65□□□□□ -0.38
HPS1Q92902 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC12.65□□□□□ -0.38
HPS1Q92902 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms