Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 POTEI-201ENST00000451531 7020 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLK1P49759 PCDHGA12-201ENST00000252085 4747 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLK1P49759 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
CLK1P49759 AGAP5-202ENST00000443782 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLK1P49759 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLK1P49759 SLC47A1-201ENST00000270570 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLK1P49759 WDR47-201ENST00000357672 4144 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CLK1P49759 AC020907.1-201ENST00000616460 1350 ntBASIC12.87□□□□□ -0.35
CLK1P49759 AOC3-201ENST00000308423 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLK1P49759 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CLK1P49759 AC239868.1-201ENST00000369385 493 ntBASIC12.87□□□□□ -0.35
CLK1P49759 GHITM-201ENST00000372134 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLK1P49759 LINC01973-201ENST00000374983 4678 ntTSL 2 BASIC12.87□□□□□ -0.35
CLK1P49759 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLK1P49759 HNRNPA1P41-201ENST00000397777 928 ntBASIC12.87□□□□□ -0.35
CLK1P49759 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC12.87□□□□□ -0.35
CLK1P49759 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLK1P49759 AKR7A2P1-201ENST00000460134 915 ntBASIC12.87□□□□□ -0.35
CLK1P49759 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC12.87□□□□□ -0.35
CLK1P49759 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC12.87□□□□□ -0.35
CLK1P49759 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
CLK1P49759 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC12.87□□□□□ -0.35
CLK1P49759 AC093752.3-201ENST00000567343 901 ntBASIC12.87□□□□□ -0.35
CLK1P49759 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC12.87□□□□□ -0.35
CLK1P49759 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC12.87□□□□□ -0.35
CLK1P49759 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC12.87□□□□□ -0.35
CLK1P49759 MIR3615-201ENST00000581999 87 ntBASIC12.87□□□□□ -0.35
CLK1P49759 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC12.87□□□□□ -0.35
CLK1P49759 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC12.87□□□□□ -0.35
CLK1P49759 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
CLK1P49759 ZNF799-202ENST00000430385 2583 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
CLK1P49759 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLK1P49759 TP53TG5-201ENST00000372726 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLK1P49759 ACSF3-201ENST00000317447 3664 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
CLK1P49759 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC12.87□□□□□ -0.35
CLK1P49759 SESN2-201ENST00000253063 3453 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLK1P49759 GPRASP1-201ENST00000361600 5971 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
CLK1P49759 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CLK1P49759 IYD-208ENST00000500320 2158 ntTSL 2 BASIC12.87□□□□□ -0.35
CLK1P49759 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLK1P49759 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC12.87□□□□□ -0.35
CLK1P49759 TMEM164-204ENST00000372073 5567 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
CLK1P49759 LINC01815-202ENST00000641468 1409 ntBASIC12.87□□□□□ -0.35
CLK1P49759 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLK1P49759 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC12.87□□□□□ -0.35
CLK1P49759 PARP10-205ENST00000525773 3404 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
CLK1P49759 KCNAB1-215ENST00000618897 4437 ntTSL 5 BASIC12.87□□□□□ -0.35
CLK1P49759 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
CLK1P49759 DNMT3B-205ENST00000443239 2674 ntTSL 2 BASIC12.86□□□□□ -0.35
CLK1P49759 MCM4-215ENST00000523944 4105 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
CLK1P49759 PPP1R26P2-201ENST00000611403 3595 ntBASIC12.86□□□□□ -0.35
CLK1P49759 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC12.86□□□□□ -0.35
CLK1P49759 BAIAP3-204ENST00000426824 3930 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
CLK1P49759 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLK1P49759 LRRC8A-201ENST00000259324 4619 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
CLK1P49759 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
CLK1P49759 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLK1P49759 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
CLK1P49759 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CLK1P49759 TRIM37-201ENST00000262294 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLK1P49759 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC12.86□□□□□ -0.35
CLK1P49759 SLC26A6-207ENST00000420764 2630 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLK1P49759 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLK1P49759 LINC00638-201ENST00000555578 2518 ntBASIC12.86□□□□□ -0.35
CLK1P49759 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC12.86□□□□□ -0.35
CLK1P49759 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC12.86□□□□□ -0.35
CLK1P49759 VWA5B2-201ENST00000273794 3486 ntTSL 2 BASIC12.86□□□□□ -0.35
CLK1P49759 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLK1P49759 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLK1P49759 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLK1P49759 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CLK1P49759 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CLK1P49759 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLK1P49759 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLK1P49759 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CLK1P49759 MIR1247-201ENST00000408206 136 ntBASIC12.86□□□□□ -0.35
CLK1P49759 SLC16A6P1-201ENST00000413214 1059 ntBASIC12.86□□□□□ -0.35
CLK1P49759 GPAA1P2-201ENST00000417923 928 ntBASIC12.86□□□□□ -0.35
CLK1P49759 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CLK1P49759 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC12.86□□□□□ -0.35
CLK1P49759 PACS1-203ENST00000524815 628 ntTSL 4 BASIC12.86□□□□□ -0.35
CLK1P49759 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC12.86□□□□□ -0.35
CLK1P49759 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CLK1P49759 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
CLK1P49759 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC12.86□□□□□ -0.35
CLK1P49759 MAX-218ENST00000557746 571 ntTSL 4 BASIC12.86□□□□□ -0.35
CLK1P49759 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC12.86□□□□□ -0.35
CLK1P49759 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC12.86□□□□□ -0.35
CLK1P49759 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC12.86□□□□□ -0.35
CLK1P49759 ZFYVE27-201ENST00000337540 2927 ntTSL 2 BASIC12.86□□□□□ -0.35
CLK1P49759 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC12.86□□□□□ -0.35
CLK1P49759 DLL1-201ENST00000366756 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLK1P49759 CACNA2D2-205ENST00000429770 5304 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
CLK1P49759 AMT-256ENST00000638063 1783 ntTSL 5 BASIC12.86□□□□□ -0.35
CLK1P49759 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC12.86□□□□□ -0.35
CLK1P49759 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC12.86□□□□□ -0.35
CLK1P49759 DNAH10OS-201ENST00000514254 5040 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
CLK1P49759 PCSK2-202ENST00000377899 4674 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CLK1P49759 GRIN2A-206ENST00000562109 4338 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CLK1P49759 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms