Protein–RNA interactions for Protein: P17655

CAPN2, Calpain-2 catalytic subunit, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2P17655 AP001094.3-201ENST00000580491 616 ntTSL 2 BASIC15.74■□□□□ 0.11
CAPN2P17655 RN7SL524P-201ENST00000581152 300 ntBASIC15.74■□□□□ 0.11
CAPN2P17655 RN7SL556P-201ENST00000582856 298 ntBASIC15.74■□□□□ 0.11
CAPN2P17655 AC012593.1-214ENST00000586952 767 ntTSL 5 BASIC15.74■□□□□ 0.11
CAPN2P17655 ZNF671-203ENST00000596939 977 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CAPN2P17655 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CAPN2P17655 AC090510.3-201ENST00000615831 821 ntBASIC15.74■□□□□ 0.11
CAPN2P17655 RARS-210ENST00000626454 177 ntTSL 5 BASIC15.74■□□□□ 0.11
CAPN2P17655 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC15.74■□□□□ 0.11
CAPN2P17655 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CAPN2P17655 KRT8P18-201ENST00000413425 1445 ntBASIC15.74■□□□□ 0.11
CAPN2P17655 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CAPN2P17655 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CAPN2P17655 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
CAPN2P17655 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CAPN2P17655 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CAPN2P17655 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CAPN2P17655 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CAPN2P17655 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
CAPN2P17655 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
CAPN2P17655 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CAPN2P17655 AC073548.1-201ENST00000624088 1882 ntBASIC15.74■□□□□ 0.11
CAPN2P17655 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN2P17655 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN2P17655 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
CAPN2P17655 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN2P17655 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.73■□□□□ 0.11
CAPN2P17655 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN2P17655 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN2P17655 HLA-E-201ENST00000376630 2601 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
CAPN2P17655 SLC26A6-207ENST00000420764 2630 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN2P17655 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN2P17655 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
CAPN2P17655 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN2P17655 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CAPN2P17655 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN2P17655 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC15.73■□□□□ 0.11
CAPN2P17655 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN2P17655 AIFM1-203ENST00000346424 1200 ntTSL 2 BASIC15.73■□□□□ 0.11
CAPN2P17655 AC106827.1-201ENST00000366454 431 ntBASIC15.73■□□□□ 0.11
CAPN2P17655 ASS1P1-201ENST00000402854 1237 ntBASIC15.73■□□□□ 0.11
CAPN2P17655 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC15.73■□□□□ 0.11
CAPN2P17655 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC15.73■□□□□ 0.11
CAPN2P17655 HNRNPA1P2-207ENST00000432375 960 ntBASIC15.73■□□□□ 0.11
CAPN2P17655 RPSAP12-201ENST00000435879 888 ntBASIC15.73■□□□□ 0.11
CAPN2P17655 DLGAP4-AS1-203ENST00000439595 1207 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN2P17655 AF274856.1-202ENST00000509345 871 ntTSL 4 BASIC15.73■□□□□ 0.11
CAPN2P17655 ACER3-205ENST00000526597 1269 ntTSL 2 BASIC15.73■□□□□ 0.11
CAPN2P17655 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CAPN2P17655 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC15.73■□□□□ 0.11
CAPN2P17655 AC142086.5-202ENST00000562500 217 ntBASIC15.73■□□□□ 0.11
CAPN2P17655 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC15.73■□□□□ 0.11
CAPN2P17655 AC079414.2-201ENST00000567157 1104 ntBASIC15.73■□□□□ 0.11
CAPN2P17655 LINC01029-202ENST00000578833 366 ntTSL 3 BASIC15.73■□□□□ 0.11
CAPN2P17655 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CAPN2P17655 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN2P17655 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
CAPN2P17655 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CAPN2P17655 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN2P17655 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN2P17655 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
CAPN2P17655 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC15.73■□□□□ 0.11
CAPN2P17655 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN2P17655 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN2P17655 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN2P17655 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN2P17655 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN2P17655 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN2P17655 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC15.73■□□□□ 0.11
CAPN2P17655 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN2P17655 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN2P17655 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN2P17655 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CAPN2P17655 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN2P17655 LILRP2-202ENST00000413572 1383 ntBASIC15.73■□□□□ 0.11
CAPN2P17655 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN2P17655 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN2P17655 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
CAPN2P17655 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC15.73■□□□□ 0.11
CAPN2P17655 AOC4P-203ENST00000566825 2289 ntBASIC15.73■□□□□ 0.11
CAPN2P17655 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CAPN2P17655 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CAPN2P17655 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CAPN2P17655 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CAPN2P17655 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CAPN2P17655 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CAPN2P17655 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CAPN2P17655 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC15.72■□□□□ 0.11
CAPN2P17655 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC15.72■□□□□ 0.11
CAPN2P17655 AC067931.2-201ENST00000623655 2003 ntBASIC15.72■□□□□ 0.11
CAPN2P17655 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CAPN2P17655 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CAPN2P17655 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.72■□□□□ 0.11
CAPN2P17655 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC15.72■□□□□ 0.11
CAPN2P17655 KRT8P24-201ENST00000560290 1559 ntBASIC15.72■□□□□ 0.11
CAPN2P17655 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC15.72■□□□□ 0.11
CAPN2P17655 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CAPN2P17655 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CAPN2P17655 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CAPN2P17655 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms