Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC12.4□□□□□ -0.42
NPIPA3F8WFD2 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
NPIPA3F8WFD2 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
NPIPA3F8WFD2 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NPIPA3F8WFD2 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
NPIPA3F8WFD2 PPP1R26P4-201ENST00000619065 3527 ntBASIC12.4□□□□□ -0.42
NPIPA3F8WFD2 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
NPIPA3F8WFD2 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
NPIPA3F8WFD2 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
NPIPA3F8WFD2 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NPIPA3F8WFD2 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC12.4□□□□□ -0.42
NPIPA3F8WFD2 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NPIPA3F8WFD2 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NPIPA3F8WFD2 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NPIPA3F8WFD2 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NPIPA3F8WFD2 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NPIPA3F8WFD2 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
NPIPA3F8WFD2 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
NPIPA3F8WFD2 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
NPIPA3F8WFD2 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
NPIPA3F8WFD2 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
NPIPA3F8WFD2 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC12.4□□□□□ -0.43
NPIPA3F8WFD2 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC12.4□□□□□ -0.43
NPIPA3F8WFD2 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
NPIPA3F8WFD2 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
NPIPA3F8WFD2 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
NPIPA3F8WFD2 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
NPIPA3F8WFD2 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NPIPA3F8WFD2 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC12.39□□□□□ -0.43
NPIPA3F8WFD2 PPFIA4-201ENST00000272198 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
NPIPA3F8WFD2 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
NPIPA3F8WFD2 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NPIPA3F8WFD2 AFF2-202ENST00000342251 7313 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NPIPA3F8WFD2 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NPIPA3F8WFD2 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
NPIPA3F8WFD2 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NPIPA3F8WFD2 MIR1301-201ENST00000408518 82 ntBASIC12.39□□□□□ -0.43
NPIPA3F8WFD2 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC12.39□□□□□ -0.43
NPIPA3F8WFD2 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NPIPA3F8WFD2 PFN2-212ENST00000490975 858 ntTSL 4 BASIC12.39□□□□□ -0.43
NPIPA3F8WFD2 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC12.39□□□□□ -0.43
NPIPA3F8WFD2 AC135782.3-201ENST00000562782 2105 ntBASIC12.39□□□□□ -0.43
NPIPA3F8WFD2 THY1-209ENST00000580275 578 ntTSL 3 BASIC12.39□□□□□ -0.43
NPIPA3F8WFD2 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
NPIPA3F8WFD2 PEBP1P2-201ENST00000603980 558 ntBASIC12.39□□□□□ -0.43
NPIPA3F8WFD2 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC12.39□□□□□ -0.43
NPIPA3F8WFD2 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC12.39□□□□□ -0.43
NPIPA3F8WFD2 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NPIPA3F8WFD2 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC12.39□□□□□ -0.43
NPIPA3F8WFD2 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NPIPA3F8WFD2 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
NPIPA3F8WFD2 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
NPIPA3F8WFD2 MFSD8-241ENST00000641686 4991 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
NPIPA3F8WFD2 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC12.39□□□□□ -0.43
NPIPA3F8WFD2 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NPIPA3F8WFD2 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NPIPA3F8WFD2 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC12.39□□□□□ -0.43
NPIPA3F8WFD2 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NPIPA3F8WFD2 ABCA3-202ENST00000382381 6446 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NPIPA3F8WFD2 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NPIPA3F8WFD2 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
NPIPA3F8WFD2 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
NPIPA3F8WFD2 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
NPIPA3F8WFD2 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
NPIPA3F8WFD2 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC12.39□□□□□ -0.43
NPIPA3F8WFD2 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC12.39□□□□□ -0.43
NPIPA3F8WFD2 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
NPIPA3F8WFD2 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
NPIPA3F8WFD2 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC12.39□□□□□ -0.43
NPIPA3F8WFD2 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
NPIPA3F8WFD2 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
NPIPA3F8WFD2 AC040160.2-201ENST00000623816 1675 ntBASIC12.38□□□□□ -0.43
NPIPA3F8WFD2 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NPIPA3F8WFD2 Z98885.3-201ENST00000624882 1757 ntBASIC12.38□□□□□ -0.43
NPIPA3F8WFD2 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NPIPA3F8WFD2 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
NPIPA3F8WFD2 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
NPIPA3F8WFD2 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NPIPA3F8WFD2 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC12.38□□□□□ -0.43
NPIPA3F8WFD2 SPECC1-206ENST00000395530 8133 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
NPIPA3F8WFD2 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC12.38□□□□□ -0.43
NPIPA3F8WFD2 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
NPIPA3F8WFD2 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC12.38□□□□□ -0.43
NPIPA3F8WFD2 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NPIPA3F8WFD2 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC12.38□□□□□ -0.43
NPIPA3F8WFD2 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NPIPA3F8WFD2 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC12.38□□□□□ -0.43
NPIPA3F8WFD2 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
NPIPA3F8WFD2 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC12.38□□□□□ -0.43
NPIPA3F8WFD2 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC12.38□□□□□ -0.43
NPIPA3F8WFD2 RHOC-205ENST00000369636 786 ntTSL 2 BASIC12.38□□□□□ -0.43
NPIPA3F8WFD2 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
NPIPA3F8WFD2 SURF4-203ENST00000371991 715 ntTSL 3 BASIC12.38□□□□□ -0.43
NPIPA3F8WFD2 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
NPIPA3F8WFD2 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
NPIPA3F8WFD2 AL139008.1-201ENST00000437894 228 ntBASIC12.38□□□□□ -0.43
NPIPA3F8WFD2 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC12.38□□□□□ -0.43
NPIPA3F8WFD2 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC12.38□□□□□ -0.43
NPIPA3F8WFD2 CD44-224ENST00000526669 870 ntTSL 5 BASIC12.38□□□□□ -0.43
NPIPA3F8WFD2 MIR3940-201ENST00000579148 102 ntBASIC12.38□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms