Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 RN7SL709P-201ENST00000478855 300 ntBASIC20.14■□□□□ 0.81
RIMBP3Q9UFD9 RN7SL317P-201ENST00000497408 329 ntBASIC20.14■□□□□ 0.81
RIMBP3Q9UFD9 AC139887.2-203ENST00000503185 618 ntTSL 2 BASIC20.14■□□□□ 0.81
RIMBP3Q9UFD9 AC139887.2-204ENST00000503405 550 ntTSL 3 BASIC20.14■□□□□ 0.81
RIMBP3Q9UFD9 SPON1-AS1-201ENST00000534587 240 ntTSL 3 BASIC20.14■□□□□ 0.81
RIMBP3Q9UFD9 AC079310.1-201ENST00000552524 700 ntTSL 3 BASIC20.14■□□□□ 0.81
RIMBP3Q9UFD9 CNIH1-207ENST00000557690 838 ntTSL 3 BASIC20.14■□□□□ 0.81
RIMBP3Q9UFD9 H3F3B-212ENST00000592643 795 ntTSL 3 BASIC20.14■□□□□ 0.81
RIMBP3Q9UFD9 KLK13-205ENST00000595547 615 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RIMBP3Q9UFD9 KLK13-206ENST00000595793 927 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RIMBP3Q9UFD9 GH1-206ENST00000617086 376 ntTSL 5 BASIC20.14■□□□□ 0.81
RIMBP3Q9UFD9 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
RIMBP3Q9UFD9 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RIMBP3Q9UFD9 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RIMBP3Q9UFD9 AL355922.2-201ENST00000557335 1398 ntTSL 2 BASIC20.14■□□□□ 0.81
RIMBP3Q9UFD9 AL928654.5-201ENST00000624831 2501 ntBASIC20.14■□□□□ 0.81
RIMBP3Q9UFD9 BTN2A2-206ENST00000469230 1790 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RIMBP3Q9UFD9 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RIMBP3Q9UFD9 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC20.14■□□□□ 0.81
RIMBP3Q9UFD9 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RIMBP3Q9UFD9 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RIMBP3Q9UFD9 RBP5-201ENST00000266560 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RIMBP3Q9UFD9 TXN2-202ENST00000403313 912 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
RIMBP3Q9UFD9 SCLT1-202ENST00000439369 966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RIMBP3Q9UFD9 RPSAP11-201ENST00000443010 881 ntBASIC20.13■□□□□ 0.81
RIMBP3Q9UFD9 AC093367.1-201ENST00000517332 420 ntBASIC20.13■□□□□ 0.81
RIMBP3Q9UFD9 AC104561.2-201ENST00000523257 519 ntBASIC20.13■□□□□ 0.81
RIMBP3Q9UFD9 AC123912.4-201ENST00000596996 1178 ntTSL 2 BASIC20.13■□□□□ 0.81
RIMBP3Q9UFD9 AP2S1-209ENST00000601498 898 ntTSL 2 BASIC20.13■□□□□ 0.81
RIMBP3Q9UFD9 AC068491.3-201ENST00000603052 606 ntBASIC20.13■□□□□ 0.81
RIMBP3Q9UFD9 CHCHD2P11-201ENST00000604283 457 ntBASIC20.13■□□□□ 0.81
RIMBP3Q9UFD9 CYP17A1-205ENST00000638272 1227 ntTSL 5 BASIC20.13■□□□□ 0.81
RIMBP3Q9UFD9 AL445250.1-205ENST00000641631 1094 ntBASIC20.13■□□□□ 0.81
RIMBP3Q9UFD9 AP000553.4-201ENST00000641967 471 ntBASIC20.13■□□□□ 0.81
RIMBP3Q9UFD9 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
RIMBP3Q9UFD9 KIR3DL2-202ENST00000326321 1877 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
RIMBP3Q9UFD9 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC20.13■□□□□ 0.81
RIMBP3Q9UFD9 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC20.13■□□□□ 0.81
RIMBP3Q9UFD9 SEPT4-204ENST00000412945 1597 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
RIMBP3Q9UFD9 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
RIMBP3Q9UFD9 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RIMBP3Q9UFD9 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RIMBP3Q9UFD9 TMEM136-201ENST00000314475 1434 ntTSL 2 BASIC20.13■□□□□ 0.81
RIMBP3Q9UFD9 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RIMBP3Q9UFD9 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
RIMBP3Q9UFD9 KRTAP4-8-201ENST00000318329 468 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
RIMBP3Q9UFD9 ZNF483-204ENST00000374374 800 ntTSL 2 BASIC20.13■□□□□ 0.81
RIMBP3Q9UFD9 AC004906.1-201ENST00000423194 969 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RIMBP3Q9UFD9 LINC00381-201ENST00000423629 727 ntTSL 5 BASIC20.13■□□□□ 0.81
RIMBP3Q9UFD9 ACTG1P21-201ENST00000431536 1000 ntBASIC20.13■□□□□ 0.81
RIMBP3Q9UFD9 IDI2-AS1-203ENST00000434470 435 ntTSL 3 BASIC20.13■□□□□ 0.81
RIMBP3Q9UFD9 AC002456.1-202ENST00000441971 450 ntTSL 2 BASIC20.13■□□□□ 0.81
RIMBP3Q9UFD9 ARL17B-202ENST00000450673 743 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RIMBP3Q9UFD9 CYCSP8-201ENST00000455007 312 ntBASIC20.13■□□□□ 0.81
RIMBP3Q9UFD9 AC145098.1-201ENST00000506025 434 ntTSL 3 BASIC20.13■□□□□ 0.81
RIMBP3Q9UFD9 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC20.13■□□□□ 0.81
RIMBP3Q9UFD9 AC120114.5-201ENST00000562285 556 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
RIMBP3Q9UFD9 AL627230.8-201ENST00000613335 202 ntBASIC20.13■□□□□ 0.81
RIMBP3Q9UFD9 FP700107.1-201ENST00000615237 1178 ntBASIC20.13■□□□□ 0.81
RIMBP3Q9UFD9 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.13■□□□□ 0.81
RIMBP3Q9UFD9 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RIMBP3Q9UFD9 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC20.12■□□□□ 0.81
RIMBP3Q9UFD9 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RIMBP3Q9UFD9 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RIMBP3Q9UFD9 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RIMBP3Q9UFD9 IL19-201ENST00000270218 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RIMBP3Q9UFD9 HYLS1-201ENST00000356438 1810 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
RIMBP3Q9UFD9 KRT40-201ENST00000377755 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RIMBP3Q9UFD9 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
RIMBP3Q9UFD9 GMPS-201ENST00000295920 2024 ntTSL 2 BASIC20.12■□□□□ 0.81
RIMBP3Q9UFD9 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC20.12■□□□□ 0.81
RIMBP3Q9UFD9 CD27-AS1-209ENST00000545339 1766 ntTSL 5 BASIC20.12■□□□□ 0.81
RIMBP3Q9UFD9 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RIMBP3Q9UFD9 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RIMBP3Q9UFD9 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RIMBP3Q9UFD9 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC20.12■□□□□ 0.81
RIMBP3Q9UFD9 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RIMBP3Q9UFD9 CICP6-201ENST00000457191 2729 ntBASIC20.12■□□□□ 0.81
RIMBP3Q9UFD9 MRPL36-201ENST00000382647 587 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
RIMBP3Q9UFD9 AC117402.1-201ENST00000485473 856 ntTSL 3 BASIC20.12■□□□□ 0.81
RIMBP3Q9UFD9 AC010551.1-201ENST00000568458 469 ntTSL 4 BASIC20.12■□□□□ 0.81
RIMBP3Q9UFD9 AC245748.1-201ENST00000588212 561 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
RIMBP3Q9UFD9 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC20.12■□□□□ 0.81
RIMBP3Q9UFD9 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RIMBP3Q9UFD9 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
RIMBP3Q9UFD9 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RIMBP3Q9UFD9 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RIMBP3Q9UFD9 FAM230B-205ENST00000424410 1856 ntTSL 5 BASIC20.11■□□□□ 0.81
RIMBP3Q9UFD9 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RIMBP3Q9UFD9 DCUN1D3-202ENST00000563934 1996 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
RIMBP3Q9UFD9 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
RIMBP3Q9UFD9 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RIMBP3Q9UFD9 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RIMBP3Q9UFD9 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
RIMBP3Q9UFD9 SNORA52-201ENST00000362915 134 ntBASIC20.11■□□□□ 0.81
RIMBP3Q9UFD9 DPCD-201ENST00000370147 641 ntTSL 2 BASIC20.11■□□□□ 0.81
RIMBP3Q9UFD9 SNORA76.1-201ENST00000516313 135 ntBASIC20.11■□□□□ 0.81
RIMBP3Q9UFD9 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
RIMBP3Q9UFD9 RN7SL509P-201ENST00000579670 297 ntBASIC20.11■□□□□ 0.81
RIMBP3Q9UFD9 AC005580.1-201ENST00000592311 583 ntTSL 4 BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 323.8 ms