Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AC091807.1-201ENST00000418838 1544 ntBASIC14.2□□□□□ -0.14
SLC1A1P43005 AAAS-201ENST00000209873 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC1A1P43005 NUP85-201ENST00000245544 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC1A1P43005 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC1A1P43005 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC1A1P43005 GPR55-205ENST00000622008 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC1A1P43005 AC139491.6-202ENST00000637171 2077 ntBASIC14.19□□□□□ -0.14
SLC1A1P43005 RBMY1E-203ENST00000382659 1921 ntAPPRIS P5 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC1A1P43005 RBMY1D-202ENST00000382680 1921 ntAPPRIS P5 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC1A1P43005 RBMY1A1-203ENST00000382707 1921 ntAPPRIS P5 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC1A1P43005 RBMY1B-202ENST00000383020 1921 ntAPPRIS P5 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC1A1P43005 GUCY2EP-203ENST00000531117 1918 ntBASIC14.19□□□□□ -0.14
SLC1A1P43005 PRR3-201ENST00000376557 1797 ntTSL 2 BASIC14.19□□□□□ -0.14
SLC1A1P43005 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC14.19□□□□□ -0.14
SLC1A1P43005 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC14.19□□□□□ -0.14
SLC1A1P43005 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC14.19□□□□□ -0.14
SLC1A1P43005 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SLC1A1P43005 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC1A1P43005 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
SLC1A1P43005 SH2D3C-202ENST00000373276 3051 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SLC1A1P43005 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC14.19□□□□□ -0.14
SLC1A1P43005 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC1A1P43005 PDE1B-203ENST00000538346 1711 ntTSL 2 BASIC14.19□□□□□ -0.14
SLC1A1P43005 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC1A1P43005 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
SLC1A1P43005 CAPRIN1-212ENST00000532820 3438 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC1A1P43005 MLX-203ENST00000435881 2428 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC1A1P43005 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC1A1P43005 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SLC1A1P43005 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC1A1P43005 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC14.19□□□□□ -0.14
SLC1A1P43005 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SLC1A1P43005 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SLC1A1P43005 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC14.19□□□□□ -0.14
SLC1A1P43005 AC022201.1-201ENST00000452525 577 ntTSL 4 BASIC14.19□□□□□ -0.14
SLC1A1P43005 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC14.19□□□□□ -0.14
SLC1A1P43005 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC14.19□□□□□ -0.14
SLC1A1P43005 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SLC1A1P43005 RN7SL564P-201ENST00000496309 250 ntBASIC14.19□□□□□ -0.14
SLC1A1P43005 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC14.19□□□□□ -0.14
SLC1A1P43005 CD44-224ENST00000526669 870 ntTSL 5 BASIC14.19□□□□□ -0.14
SLC1A1P43005 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC14.19□□□□□ -0.14
SLC1A1P43005 MIR3619-201ENST00000579667 83 ntBASIC14.19□□□□□ -0.14
SLC1A1P43005 MIR2392-201ENST00000584881 84 ntBASIC14.19□□□□□ -0.14
SLC1A1P43005 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC14.19□□□□□ -0.14
SLC1A1P43005 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC14.19□□□□□ -0.14
SLC1A1P43005 AP001505.2-201ENST00000616815 443 ntBASIC14.19□□□□□ -0.14
SLC1A1P43005 CMC2-224ENST00000630396 481 ntTSL 5 BASIC14.19□□□□□ -0.14
SLC1A1P43005 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC1A1P43005 KLF4-206ENST00000610832 1956 ntTSL 5 BASIC14.19□□□□□ -0.14
SLC1A1P43005 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC1A1P43005 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC1A1P43005 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SLC1A1P43005 GOLGA2P5-201ENST00000266746 2395 ntBASIC14.19□□□□□ -0.14
SLC1A1P43005 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC1A1P43005 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SLC1A1P43005 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC1A1P43005 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC1A1P43005 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC14.19□□□□□ -0.14
SLC1A1P43005 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC14.19□□□□□ -0.14
SLC1A1P43005 AC138150.2-201ENST00000589796 2053 ntTSL 2 BASIC14.19□□□□□ -0.14
SLC1A1P43005 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SLC1A1P43005 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC1A1P43005 MSANTD2P1-201ENST00000445341 1368 ntBASIC14.19□□□□□ -0.14
SLC1A1P43005 CAP2P1-201ENST00000557743 1390 ntBASIC14.19□□□□□ -0.14
SLC1A1P43005 FHOD3-207ENST00000591635 3035 ntTSL 5 BASIC14.19□□□□□ -0.14
SLC1A1P43005 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
SLC1A1P43005 ARHGEF9-226ENST00000636392 1920 ntTSL 5 BASIC14.19□□□□□ -0.14
SLC1A1P43005 AFG3L2P1-201ENST00000521792 1763 ntBASIC14.19□□□□□ -0.14
SLC1A1P43005 DDC-206ENST00000431062 1620 ntTSL 5 BASIC14.19□□□□□ -0.14
SLC1A1P43005 FBXO5-201ENST00000229758 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC1A1P43005 TTN-AS1-209ENST00000456053 2033 ntTSL 2 BASIC14.19□□□□□ -0.14
SLC1A1P43005 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLC1A1P43005 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLC1A1P43005 SERPING1-202ENST00000340687 1719 ntTSL 5 BASIC14.18□□□□□ -0.14
SLC1A1P43005 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLC1A1P43005 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLC1A1P43005 RBM15-201ENST00000369784 4244 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SLC1A1P43005 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLC1A1P43005 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLC1A1P43005 AC007431.1-201ENST00000578662 1412 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SLC1A1P43005 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SLC1A1P43005 HMGB1-202ENST00000339872 2319 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SLC1A1P43005 UGT3A1-203ENST00000503189 1902 ntTSL 2 BASIC14.18□□□□□ -0.14
SLC1A1P43005 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLC1A1P43005 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
SLC1A1P43005 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SLC1A1P43005 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLC1A1P43005 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLC1A1P43005 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC14.18□□□□□ -0.14
SLC1A1P43005 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLC1A1P43005 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SLC1A1P43005 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC14.18□□□□□ -0.14
SLC1A1P43005 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SLC1A1P43005 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SLC1A1P43005 OR52M2P-201ENST00000414298 959 ntBASIC14.18□□□□□ -0.14
SLC1A1P43005 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC14.18□□□□□ -0.14
SLC1A1P43005 AL592076.1-201ENST00000424448 303 ntBASIC14.18□□□□□ -0.14
SLC1A1P43005 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLC1A1P43005 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms