Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 NSD2-206ENST00000382895 7827 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOA4P06727 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOA4P06727 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOA4P06727 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOA4P06727 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOA4P06727 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
APOA4P06727 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOA4P06727 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOA4P06727 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOA4P06727 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
APOA4P06727 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC13.66□□□□□ -0.22
APOA4P06727 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC13.66□□□□□ -0.22
APOA4P06727 RN7SL769P-201ENST00000469386 295 ntBASIC13.66□□□□□ -0.22
APOA4P06727 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
APOA4P06727 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC13.66□□□□□ -0.22
APOA4P06727 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
APOA4P06727 IMP3P2-201ENST00000489760 475 ntBASIC13.66□□□□□ -0.22
APOA4P06727 AC095040.1-201ENST00000513286 675 ntBASIC13.66□□□□□ -0.22
APOA4P06727 AC134698.3-201ENST00000523880 214 ntBASIC13.66□□□□□ -0.22
APOA4P06727 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC13.66□□□□□ -0.22
APOA4P06727 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC13.66□□□□□ -0.22
APOA4P06727 AP005264.5-201ENST00000590066 467 ntBASIC13.66□□□□□ -0.22
APOA4P06727 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC13.66□□□□□ -0.22
APOA4P06727 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC13.66□□□□□ -0.22
APOA4P06727 AC009145.4-201ENST00000625119 1294 ntBASIC13.66□□□□□ -0.22
APOA4P06727 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC13.66□□□□□ -0.22
APOA4P06727 PES1P2-201ENST00000449745 1735 ntBASIC13.66□□□□□ -0.22
APOA4P06727 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOA4P06727 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC13.66□□□□□ -0.22
APOA4P06727 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC13.66□□□□□ -0.22
APOA4P06727 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOA4P06727 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
APOA4P06727 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOA4P06727 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOA4P06727 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
APOA4P06727 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC13.66□□□□□ -0.22
APOA4P06727 UBTF-209ENST00000529383 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOA4P06727 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC13.66□□□□□ -0.22
APOA4P06727 AGAP12P-202ENST00000603888 2141 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
APOA4P06727 PHF10-206ENST00000621772 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOA4P06727 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOA4P06727 KIR3DL1-203ENST00000391728 1871 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOA4P06727 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOA4P06727 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
APOA4P06727 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOA4P06727 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC13.65□□□□□ -0.22
APOA4P06727 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOA4P06727 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
APOA4P06727 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOA4P06727 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
APOA4P06727 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOA4P06727 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
APOA4P06727 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOA4P06727 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC13.65□□□□□ -0.22
APOA4P06727 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
APOA4P06727 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
APOA4P06727 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
APOA4P06727 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
APOA4P06727 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOA4P06727 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOA4P06727 PYY2-201ENST00000315776 282 ntBASIC13.65□□□□□ -0.22
APOA4P06727 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC13.65□□□□□ -0.22
APOA4P06727 NME4-203ENST00000397722 1232 ntTSL 2 BASIC13.65□□□□□ -0.22
APOA4P06727 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
APOA4P06727 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOA4P06727 AL512306.1-201ENST00000432698 848 ntBASIC13.65□□□□□ -0.22
APOA4P06727 ERP29P1-201ENST00000442902 706 ntBASIC13.65□□□□□ -0.22
APOA4P06727 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC13.65□□□□□ -0.22
APOA4P06727 AC018638.5-201ENST00000450885 754 ntBASIC13.65□□□□□ -0.22
APOA4P06727 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC13.65□□□□□ -0.22
APOA4P06727 PDCD2-205ENST00000537445 1114 ntTSL 3 BASIC13.65□□□□□ -0.22
APOA4P06727 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC13.65□□□□□ -0.22
APOA4P06727 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC13.65□□□□□ -0.22
APOA4P06727 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC13.65□□□□□ -0.22
APOA4P06727 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC13.65□□□□□ -0.22
APOA4P06727 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC13.65□□□□□ -0.22
APOA4P06727 AL031673.1-201ENST00000611460 466 ntBASIC13.65□□□□□ -0.22
APOA4P06727 NXPE3-201ENST00000273347 3941 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOA4P06727 TXNDC17-201ENST00000250101 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOA4P06727 ZNF124-202ENST00000472531 2243 ntTSL 2 BASIC13.65□□□□□ -0.22
APOA4P06727 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
APOA4P06727 RBM15-204ENST00000617047 3284 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
APOA4P06727 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC13.65□□□□□ -0.22
APOA4P06727 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC13.65□□□□□ -0.22
APOA4P06727 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOA4P06727 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC13.65□□□□□ -0.22
APOA4P06727 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
APOA4P06727 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOA4P06727 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
APOA4P06727 AC244453.2-201ENST00000457996 3543 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
APOA4P06727 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC13.65□□□□□ -0.22
APOA4P06727 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC13.65□□□□□ -0.22
APOA4P06727 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
APOA4P06727 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
APOA4P06727 PDXDC2P-206ENST00000534700 1315 ntBASIC13.64□□□□□ -0.23
APOA4P06727 AXIN2-209ENST00000618960 4060 ntTSL 5 BASIC13.64□□□□□ -0.23
APOA4P06727 SLC16A2-201ENST00000587091 4161 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOA4P06727 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOA4P06727 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
APOA4P06727 CCDC163-203ENST00000626657 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms