Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC12.62□□□□□ -0.39
POLR2J2Q9GZM3 AL451050.2-201ENST00000606967 682 ntBASIC12.62□□□□□ -0.39
POLR2J2Q9GZM3 ABBA01031663.1-201ENST00000635630 790 ntBASIC12.62□□□□□ -0.39
POLR2J2Q9GZM3 DPP8-201ENST00000300141 3139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
POLR2J2Q9GZM3 STAT6-202ENST00000454075 3037 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
POLR2J2Q9GZM3 ESYT1-202ENST00000394048 4388 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
POLR2J2Q9GZM3 PPP4R3B-206ENST00000616407 4385 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
POLR2J2Q9GZM3 MRVI1-202ENST00000424001 5815 ntTSL 5 BASIC12.62□□□□□ -0.39
POLR2J2Q9GZM3 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
POLR2J2Q9GZM3 AGAP5-202ENST00000443782 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
POLR2J2Q9GZM3 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
POLR2J2Q9GZM3 CASC4-202ENST00000345795 3764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
POLR2J2Q9GZM3 FRMD6-203ENST00000395718 4828 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
POLR2J2Q9GZM3 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC12.62□□□□□ -0.39
POLR2J2Q9GZM3 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
POLR2J2Q9GZM3 SEC24B-201ENST00000265175 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
POLR2J2Q9GZM3 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
POLR2J2Q9GZM3 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC12.62□□□□□ -0.39
POLR2J2Q9GZM3 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
POLR2J2Q9GZM3 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
POLR2J2Q9GZM3 CCDC163-203ENST00000626657 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
POLR2J2Q9GZM3 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
POLR2J2Q9GZM3 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
POLR2J2Q9GZM3 ASCC3-203ENST00000369143 3433 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
POLR2J2Q9GZM3 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC12.62□□□□□ -0.39
POLR2J2Q9GZM3 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
POLR2J2Q9GZM3 NPTN-IT1-201ENST00000628401 2283 ntBASIC12.62□□□□□ -0.39
POLR2J2Q9GZM3 OR8J1-202ENST00000533152 1320 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
POLR2J2Q9GZM3 WTH3DI-201ENST00000623617 3032 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
POLR2J2Q9GZM3 PSMD12-201ENST00000356126 4406 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
POLR2J2Q9GZM3 KIF9-208ENST00000452770 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
POLR2J2Q9GZM3 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
POLR2J2Q9GZM3 KIR3DL1-203ENST00000391728 1871 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
POLR2J2Q9GZM3 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC12.61□□□□□ -0.39
POLR2J2Q9GZM3 DNAJB12-202ENST00000394903 3198 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
POLR2J2Q9GZM3 FAM13B-203ENST00000425075 3098 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
POLR2J2Q9GZM3 SLC23A1-202ENST00000353963 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
POLR2J2Q9GZM3 DCAF11-204ENST00000446197 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
POLR2J2Q9GZM3 HSPA2-201ENST00000247207 2767 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
POLR2J2Q9GZM3 NDRG4-201ENST00000258187 3324 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
POLR2J2Q9GZM3 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC12.61□□□□□ -0.39
POLR2J2Q9GZM3 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC12.61□□□□□ -0.39
POLR2J2Q9GZM3 HSPA8P9-201ENST00000485881 1943 ntBASIC12.61□□□□□ -0.39
POLR2J2Q9GZM3 NXPE3-201ENST00000273347 3941 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
POLR2J2Q9GZM3 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC12.61□□□□□ -0.39
POLR2J2Q9GZM3 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
POLR2J2Q9GZM3 ALG6-202ENST00000371108 3371 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
POLR2J2Q9GZM3 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
POLR2J2Q9GZM3 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
POLR2J2Q9GZM3 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
POLR2J2Q9GZM3 HNRNPA1P32-201ENST00000396326 963 ntBASIC12.61□□□□□ -0.39
POLR2J2Q9GZM3 GGTLC4P-201ENST00000402176 664 ntBASIC12.61□□□□□ -0.39
POLR2J2Q9GZM3 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC12.61□□□□□ -0.39
POLR2J2Q9GZM3 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC12.61□□□□□ -0.39
POLR2J2Q9GZM3 ATP5G2P4-201ENST00000442175 420 ntBASIC12.61□□□□□ -0.39
POLR2J2Q9GZM3 AC104306.2-201ENST00000451877 341 ntBASIC12.61□□□□□ -0.39
POLR2J2Q9GZM3 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC12.61□□□□□ -0.39
POLR2J2Q9GZM3 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC12.61□□□□□ -0.39
POLR2J2Q9GZM3 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC12.61□□□□□ -0.39
POLR2J2Q9GZM3 POU5F1P2-201ENST00000521750 823 ntBASIC12.61□□□□□ -0.39
POLR2J2Q9GZM3 KLF17P1-201ENST00000547105 1126 ntBASIC12.61□□□□□ -0.39
POLR2J2Q9GZM3 RN7SL665P-201ENST00000578793 300 ntBASIC12.61□□□□□ -0.39
POLR2J2Q9GZM3 NAT9-222ENST00000583476 583 ntTSL 3 BASIC12.61□□□□□ -0.39
POLR2J2Q9GZM3 AL645939.5-201ENST00000606834 243 ntBASIC12.61□□□□□ -0.39
POLR2J2Q9GZM3 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC12.61□□□□□ -0.39
POLR2J2Q9GZM3 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC12.61□□□□□ -0.39
POLR2J2Q9GZM3 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
POLR2J2Q9GZM3 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
POLR2J2Q9GZM3 TCF3-202ENST00000344749 4289 ntTSL 5 BASIC12.61□□□□□ -0.39
POLR2J2Q9GZM3 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
POLR2J2Q9GZM3 CAPN1-202ENST00000524773 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
POLR2J2Q9GZM3 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
POLR2J2Q9GZM3 MBOAT4-201ENST00000320542 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
POLR2J2Q9GZM3 AL133338.1-201ENST00000565695 1517 ntBASIC12.61□□□□□ -0.39
POLR2J2Q9GZM3 GSTM3-201ENST00000256594 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
POLR2J2Q9GZM3 MATN2-211ENST00000521689 3554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
POLR2J2Q9GZM3 TPO-202ENST00000345913 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
POLR2J2Q9GZM3 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC12.61□□□□□ -0.39
POLR2J2Q9GZM3 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
POLR2J2Q9GZM3 TIAM1-201ENST00000286827 7200 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
POLR2J2Q9GZM3 AC012531.1-201ENST00000562848 2680 ntBASIC12.61□□□□□ -0.39
POLR2J2Q9GZM3 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC12.61□□□□□ -0.39
POLR2J2Q9GZM3 AC092028.1-202ENST00000641483 3547 ntBASIC12.61□□□□□ -0.39
POLR2J2Q9GZM3 AC092028.1-201ENST00000641781 3540 ntBASIC12.61□□□□□ -0.39
POLR2J2Q9GZM3 LAS1L-202ENST00000374807 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
POLR2J2Q9GZM3 CCDC97-201ENST00000269967 3322 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
POLR2J2Q9GZM3 GRIN1-205ENST00000371555 4003 ntTSL 5 BASIC12.6□□□□□ -0.39
POLR2J2Q9GZM3 GRIA4-210ENST00000527669 2647 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
POLR2J2Q9GZM3 MICAL1-208ENST00000630715 3678 ntTSL 2 BASIC12.6□□□□□ -0.39
POLR2J2Q9GZM3 TRMT61A-202ENST00000389749 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
POLR2J2Q9GZM3 CCDC14-220ENST00000488653 4156 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
POLR2J2Q9GZM3 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC12.6□□□□□ -0.39
POLR2J2Q9GZM3 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
POLR2J2Q9GZM3 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
POLR2J2Q9GZM3 TLE3-220ENST00000559929 3408 ntTSL 5 BASIC12.6□□□□□ -0.39
POLR2J2Q9GZM3 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
POLR2J2Q9GZM3 RC3H2-201ENST00000335387 3081 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
POLR2J2Q9GZM3 DCAF16-201ENST00000382247 4548 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
POLR2J2Q9GZM3 PAM-203ENST00000346918 3302 ntTSL 5 BASIC12.6□□□□□ -0.39
POLR2J2Q9GZM3 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms