Protein–RNA interactions for Protein: Q8TC41

RNF217, Probable E3 ubiquitin-protein ligase RNF217, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF217Q8TC41 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC13.31□□□□□ -0.28
RNF217Q8TC41 PTPA-215ENST00000432124 567 ntTSL 4 BASIC13.31□□□□□ -0.28
RNF217Q8TC41 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC13.31□□□□□ -0.28
RNF217Q8TC41 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC13.31□□□□□ -0.28
RNF217Q8TC41 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC13.31□□□□□ -0.28
RNF217Q8TC41 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RNF217Q8TC41 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC13.31□□□□□ -0.28
RNF217Q8TC41 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC13.31□□□□□ -0.28
RNF217Q8TC41 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC13.31□□□□□ -0.28
RNF217Q8TC41 IGHVIII-5-2-201ENST00000522505 261 ntBASIC13.31□□□□□ -0.28
RNF217Q8TC41 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RNF217Q8TC41 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RNF217Q8TC41 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC13.31□□□□□ -0.28
RNF217Q8TC41 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
RNF217Q8TC41 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC13.31□□□□□ -0.28
RNF217Q8TC41 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC13.31□□□□□ -0.28
RNF217Q8TC41 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC13.31□□□□□ -0.28
RNF217Q8TC41 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC13.31□□□□□ -0.28
RNF217Q8TC41 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RNF217Q8TC41 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC13.31□□□□□ -0.28
RNF217Q8TC41 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC13.31□□□□□ -0.28
RNF217Q8TC41 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.31□□□□□ -0.28
RNF217Q8TC41 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
RNF217Q8TC41 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC13.31□□□□□ -0.28
RNF217Q8TC41 TUT1-202ENST00000308436 2826 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RNF217Q8TC41 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC13.31□□□□□ -0.28
RNF217Q8TC41 MKX-202ENST00000419761 3638 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
RNF217Q8TC41 COL19A1-205ENST00000620364 6233 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RNF217Q8TC41 NEDD4L-208ENST00000456173 4978 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RNF217Q8TC41 POU5F2-201ENST00000606183 8418 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
RNF217Q8TC41 TLE4-201ENST00000265284 2382 ntTSL 2 BASIC13.31□□□□□ -0.28
RNF217Q8TC41 AC009533.1-201ENST00000539757 3158 ntBASIC13.31□□□□□ -0.28
RNF217Q8TC41 SMIM10L1-201ENST00000622602 4795 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
RNF217Q8TC41 PRKG2-201ENST00000264399 4822 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
RNF217Q8TC41 MARCH10-209ENST00000583600 3214 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RNF217Q8TC41 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RNF217Q8TC41 CCDC57-205ENST00000392346 2964 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
RNF217Q8TC41 YTHDC1-201ENST00000344157 6232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RNF217Q8TC41 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
RNF217Q8TC41 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RNF217Q8TC41 TIAM2-201ENST00000275246 2491 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RNF217Q8TC41 PIK3CD-202ENST00000377346 5203 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RNF217Q8TC41 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RNF217Q8TC41 PMEL-204ENST00000548493 2204 ntAPPRIS P3 TSL 2 BASIC13.31□□□□□ -0.28
RNF217Q8TC41 DDX11-223ENST00000542838 3079 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RNF217Q8TC41 MINK1-203ENST00000453408 3939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RNF217Q8TC41 WNK1-202ENST00000340908 11208 ntTSL 5 BASIC13.31□□□□□ -0.28
RNF217Q8TC41 ARHGAP40-202ENST00000373345 2841 ntAPPRIS P5 TSL 5 BASIC13.31□□□□□ -0.28
RNF217Q8TC41 IFT22-211ENST00000621899 2272 ntTSL 2 BASIC13.3□□□□□ -0.28
RNF217Q8TC41 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RNF217Q8TC41 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC13.3□□□□□ -0.28
RNF217Q8TC41 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC13.3□□□□□ -0.28
RNF217Q8TC41 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
RNF217Q8TC41 FER1L5-207ENST00000641731 6294 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
RNF217Q8TC41 CPT1B-204ENST00000405237 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RNF217Q8TC41 LCMT1-AS2-201ENST00000562280 2601 ntTSL 2 BASIC13.3□□□□□ -0.28
RNF217Q8TC41 ASB7-201ENST00000332783 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RNF217Q8TC41 ARL3-201ENST00000260746 3844 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RNF217Q8TC41 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC13.3□□□□□ -0.28
RNF217Q8TC41 Z97192.1-201ENST00000391625 3894 ntTSL 2 BASIC13.3□□□□□ -0.28
RNF217Q8TC41 CTBP1-AS2-202ENST00000505364 2423 ntTSL 2 BASIC13.3□□□□□ -0.28
RNF217Q8TC41 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RNF217Q8TC41 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RNF217Q8TC41 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
RNF217Q8TC41 ACSL1-210ENST00000513317 2469 ntAPPRIS ALT1 TSL 2 BASIC13.3□□□□□ -0.28
RNF217Q8TC41 PPARD-204ENST00000418635 3453 ntTSL 2 BASIC13.3□□□□□ -0.28
RNF217Q8TC41 ARF3-201ENST00000256682 4105 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RNF217Q8TC41 FBN3-201ENST00000270509 9232 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RNF217Q8TC41 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC13.3□□□□□ -0.28
RNF217Q8TC41 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RNF217Q8TC41 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RNF217Q8TC41 AL136309.1-201ENST00000403917 691 ntBASIC13.3□□□□□ -0.28
RNF217Q8TC41 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC13.3□□□□□ -0.28
RNF217Q8TC41 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC13.3□□□□□ -0.28
RNF217Q8TC41 FAM9B-203ENST00000428477 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RNF217Q8TC41 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
RNF217Q8TC41 SKA2-202ENST00000437036 625 ntTSL 2 BASIC13.3□□□□□ -0.28
RNF217Q8TC41 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RNF217Q8TC41 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC13.3□□□□□ -0.28
RNF217Q8TC41 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
RNF217Q8TC41 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RNF217Q8TC41 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC13.3□□□□□ -0.28
RNF217Q8TC41 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC13.3□□□□□ -0.28
RNF217Q8TC41 AL358472.3-201ENST00000608147 415 ntBASIC13.3□□□□□ -0.28
RNF217Q8TC41 ZACNP1-201ENST00000612259 710 ntBASIC13.3□□□□□ -0.28
RNF217Q8TC41 FANCA-202ENST00000389301 5451 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
RNF217Q8TC41 DMBT1-201ENST00000330163 5802 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RNF217Q8TC41 DMBT1-206ENST00000368956 5802 ntTSL 5 BASIC13.3□□□□□ -0.28
RNF217Q8TC41 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RNF217Q8TC41 MAP3K9-205ENST00000554752 11169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
RNF217Q8TC41 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC13.3□□□□□ -0.28
RNF217Q8TC41 ZFC3H1-201ENST00000378743 7285 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RNF217Q8TC41 MSL3-207ENST00000398527 2324 ntTSL 2 BASIC13.3□□□□□ -0.28
RNF217Q8TC41 FOSB-210ENST00000591858 3658 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RNF217Q8TC41 ABCC3-201ENST00000285238 5716 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RNF217Q8TC41 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RNF217Q8TC41 PCBP1-AS1-227ENST00000435880 2386 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RNF217Q8TC41 LGALS3BP-201ENST00000262776 2405 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RNF217Q8TC41 STX3-207ENST00000633708 3111 ntTSL 5 BASIC13.3□□□□□ -0.28
RNF217Q8TC41 PANK3-201ENST00000239231 10506 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms