Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
LYSMD3Q7Z3D4 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC13.71□□□□□ -0.21
LYSMD3Q7Z3D4 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
LYSMD3Q7Z3D4 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LYSMD3Q7Z3D4 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC13.71□□□□□ -0.21
LYSMD3Q7Z3D4 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC13.71□□□□□ -0.21
LYSMD3Q7Z3D4 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LYSMD3Q7Z3D4 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LYSMD3Q7Z3D4 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LYSMD3Q7Z3D4 AC131902.2-201ENST00000566892 2172 ntBASIC13.71□□□□□ -0.21
LYSMD3Q7Z3D4 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LYSMD3Q7Z3D4 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
LYSMD3Q7Z3D4 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
LYSMD3Q7Z3D4 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LYSMD3Q7Z3D4 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LYSMD3Q7Z3D4 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LYSMD3Q7Z3D4 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
LYSMD3Q7Z3D4 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
LYSMD3Q7Z3D4 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LYSMD3Q7Z3D4 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
LYSMD3Q7Z3D4 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
LYSMD3Q7Z3D4 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LYSMD3Q7Z3D4 ACTBP14-201ENST00000411655 1089 ntBASIC13.71□□□□□ -0.21
LYSMD3Q7Z3D4 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC13.71□□□□□ -0.21
LYSMD3Q7Z3D4 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC13.71□□□□□ -0.21
LYSMD3Q7Z3D4 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC13.71□□□□□ -0.21
LYSMD3Q7Z3D4 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC13.71□□□□□ -0.21
LYSMD3Q7Z3D4 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC13.71□□□□□ -0.21
LYSMD3Q7Z3D4 AC006518.1-201ENST00000541449 943 ntBASIC13.71□□□□□ -0.21
LYSMD3Q7Z3D4 RN7SL556P-201ENST00000582856 298 ntBASIC13.71□□□□□ -0.21
LYSMD3Q7Z3D4 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC13.71□□□□□ -0.21
LYSMD3Q7Z3D4 AC012087.1-201ENST00000608068 809 ntTSL 5 BASIC13.71□□□□□ -0.21
LYSMD3Q7Z3D4 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LYSMD3Q7Z3D4 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC13.71□□□□□ -0.21
LYSMD3Q7Z3D4 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LYSMD3Q7Z3D4 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
LYSMD3Q7Z3D4 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LYSMD3Q7Z3D4 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC13.71□□□□□ -0.22
LYSMD3Q7Z3D4 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LYSMD3Q7Z3D4 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LYSMD3Q7Z3D4 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
LYSMD3Q7Z3D4 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.22
LYSMD3Q7Z3D4 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
LYSMD3Q7Z3D4 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LYSMD3Q7Z3D4 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LYSMD3Q7Z3D4 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC13.71□□□□□ -0.22
LYSMD3Q7Z3D4 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC13.71□□□□□ -0.22
LYSMD3Q7Z3D4 AC007336.3-201ENST00000623886 2160 ntBASIC13.71□□□□□ -0.22
LYSMD3Q7Z3D4 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LYSMD3Q7Z3D4 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC13.71□□□□□ -0.22
LYSMD3Q7Z3D4 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
LYSMD3Q7Z3D4 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
LYSMD3Q7Z3D4 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC13.7□□□□□ -0.22
LYSMD3Q7Z3D4 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
LYSMD3Q7Z3D4 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LYSMD3Q7Z3D4 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LYSMD3Q7Z3D4 PINX1-201ENST00000314787 1545 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
LYSMD3Q7Z3D4 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
LYSMD3Q7Z3D4 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LYSMD3Q7Z3D4 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
LYSMD3Q7Z3D4 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC13.7□□□□□ -0.22
LYSMD3Q7Z3D4 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LYSMD3Q7Z3D4 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LYSMD3Q7Z3D4 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
LYSMD3Q7Z3D4 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
LYSMD3Q7Z3D4 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC13.7□□□□□ -0.22
LYSMD3Q7Z3D4 AC024075.2-201ENST00000598112 1473 ntBASIC13.7□□□□□ -0.22
LYSMD3Q7Z3D4 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LYSMD3Q7Z3D4 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.7□□□□□ -0.22
LYSMD3Q7Z3D4 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LYSMD3Q7Z3D4 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
LYSMD3Q7Z3D4 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LYSMD3Q7Z3D4 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LYSMD3Q7Z3D4 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.7□□□□□ -0.22
LYSMD3Q7Z3D4 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LYSMD3Q7Z3D4 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LYSMD3Q7Z3D4 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LYSMD3Q7Z3D4 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LYSMD3Q7Z3D4 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC13.7□□□□□ -0.22
LYSMD3Q7Z3D4 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC13.7□□□□□ -0.22
LYSMD3Q7Z3D4 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC13.7□□□□□ -0.22
LYSMD3Q7Z3D4 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
LYSMD3Q7Z3D4 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC13.7□□□□□ -0.22
LYSMD3Q7Z3D4 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC13.7□□□□□ -0.22
LYSMD3Q7Z3D4 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC13.7□□□□□ -0.22
LYSMD3Q7Z3D4 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC13.7□□□□□ -0.22
LYSMD3Q7Z3D4 AC079250.1-201ENST00000456046 531 ntBASIC13.7□□□□□ -0.22
LYSMD3Q7Z3D4 AC006529.1-201ENST00000459978 637 ntBASIC13.7□□□□□ -0.22
LYSMD3Q7Z3D4 MBP-227ENST00000526111 581 ntTSL 4 BASIC13.7□□□□□ -0.22
LYSMD3Q7Z3D4 SAA2-206ENST00000530400 323 ntTSL 3 BASIC13.7□□□□□ -0.22
LYSMD3Q7Z3D4 AP003398.1-201ENST00000531124 318 ntBASIC13.7□□□□□ -0.22
LYSMD3Q7Z3D4 MIR4649-201ENST00000582839 64 ntBASIC13.7□□□□□ -0.22
LYSMD3Q7Z3D4 RN7SL736P-201ENST00000613111 269 ntBASIC13.7□□□□□ -0.22
LYSMD3Q7Z3D4 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC13.7□□□□□ -0.22
LYSMD3Q7Z3D4 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
LYSMD3Q7Z3D4 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
LYSMD3Q7Z3D4 ZFYVE19-202ENST00000336455 1784 ntTSL 2 BASIC13.7□□□□□ -0.22
LYSMD3Q7Z3D4 OS9-203ENST00000389142 2457 ntTSL 5 BASIC13.7□□□□□ -0.22
LYSMD3Q7Z3D4 SMARCA2-254ENST00000636903 2471 ntTSL 5 BASIC13.7□□□□□ -0.22
LYSMD3Q7Z3D4 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms