Protein–RNA interactions for Protein: Q04656

ATP7A, Copper-transporting ATPase 1, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7AQ04656 HDGF-203ENST00000368209 2171 ntTSL 2 BASIC19.32■□□□□ 0.68
ATP7AQ04656 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
ATP7AQ04656 ENO3-201ENST00000323997 1521 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
ATP7AQ04656 MMD2-203ENST00000406755 2372 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ATP7AQ04656 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
ATP7AQ04656 LCE2D-201ENST00000368784 609 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATP7AQ04656 RNF7-202ENST00000393000 805 ntTSL 2 BASIC19.31■□□□□ 0.68
ATP7AQ04656 AC064836.1-201ENST00000405197 704 ntBASIC19.31■□□□□ 0.68
ATP7AQ04656 ART2P-201ENST00000415521 822 ntBASIC19.31■□□□□ 0.68
ATP7AQ04656 ALMS1P1-201ENST00000428767 921 ntBASIC19.31■□□□□ 0.68
ATP7AQ04656 AC246817.2-204ENST00000517984 562 ntTSL 4 BASIC19.31■□□□□ 0.68
ATP7AQ04656 KCNE3-202ENST00000525550 935 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATP7AQ04656 AC244102.2-201ENST00000597568 955 ntBASIC19.31■□□□□ 0.68
ATP7AQ04656 AC091941.1-201ENST00000623003 576 ntBASIC19.31■□□□□ 0.68
ATP7AQ04656 FAM92B-203ENST00000629253 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATP7AQ04656 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
ATP7AQ04656 ZNF772-203ENST00000425074 1601 ntTSL 2 BASIC19.31■□□□□ 0.68
ATP7AQ04656 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATP7AQ04656 VPS26A-203ENST00000395098 2554 ntTSL 5 BASIC19.31■□□□□ 0.68
ATP7AQ04656 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATP7AQ04656 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATP7AQ04656 GAPDHS-201ENST00000222286 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATP7AQ04656 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATP7AQ04656 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATP7AQ04656 APTX-206ENST00000379825 2023 ntTSL 2 BASIC19.31■□□□□ 0.68
ATP7AQ04656 AC006262.1-201ENST00000593980 1316 ntTSL 5 BASIC19.31■□□□□ 0.68
ATP7AQ04656 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC19.31■□□□□ 0.68
ATP7AQ04656 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
ATP7AQ04656 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATP7AQ04656 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATP7AQ04656 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
ATP7AQ04656 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATP7AQ04656 NNMT-201ENST00000299964 1610 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATP7AQ04656 ZNF816-201ENST00000270457 582 ntTSL 3 BASIC19.3■□□□□ 0.68
ATP7AQ04656 FAM45BP-201ENST00000408950 1074 ntBASIC19.3■□□□□ 0.68
ATP7AQ04656 MTND6P9-201ENST00000458075 519 ntBASIC19.3■□□□□ 0.68
ATP7AQ04656 RN7SL487P-201ENST00000468140 344 ntBASIC19.3■□□□□ 0.68
ATP7AQ04656 AC092944.1-204ENST00000475102 384 ntTSL 5 BASIC19.3■□□□□ 0.68
ATP7AQ04656 AC015563.2-201ENST00000579580 772 ntTSL 3 BASIC19.3■□□□□ 0.68
ATP7AQ04656 PSMG3-AS1-207ENST00000612019 586 ntTSL 4 BASIC19.3■□□□□ 0.68
ATP7AQ04656 MIR6819-201ENST00000622122 61 ntBASIC19.3■□□□□ 0.68
ATP7AQ04656 AC010976.1-201ENST00000631170 734 ntTSL 5 BASIC19.3■□□□□ 0.68
ATP7AQ04656 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ATP7AQ04656 CEP70-208ENST00000474781 2028 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
ATP7AQ04656 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATP7AQ04656 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATP7AQ04656 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
ATP7AQ04656 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATP7AQ04656 PSMD13-201ENST00000352303 1427 ntTSL 5 BASIC19.3■□□□□ 0.68
ATP7AQ04656 PTAFR-201ENST00000305392 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATP7AQ04656 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATP7AQ04656 C20orf96-203ENST00000400269 1608 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATP7AQ04656 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATP7AQ04656 KRT40-201ENST00000377755 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATP7AQ04656 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATP7AQ04656 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATP7AQ04656 ACOX2-201ENST00000302819 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATP7AQ04656 PRKCE-202ENST00000394874 996 ntTSL 3 BASIC19.3■□□□□ 0.68
ATP7AQ04656 AC009238.3-201ENST00000512705 217 ntBASIC19.3■□□□□ 0.68
ATP7AQ04656 MRNIP-216ENST00000521333 410 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
ATP7AQ04656 BCAR1P1-201ENST00000553953 636 ntBASIC19.3■□□□□ 0.68
ATP7AQ04656 AL592146.2-201ENST00000565388 444 ntTSL 5 BASIC19.3■□□□□ 0.68
ATP7AQ04656 AC002558.2-201ENST00000572193 673 ntTSL 3 BASIC19.3■□□□□ 0.68
ATP7AQ04656 AC080038.2-201ENST00000617734 423 ntBASIC19.3■□□□□ 0.68
ATP7AQ04656 AL109618.3-201ENST00000622748 430 ntBASIC19.3■□□□□ 0.68
ATP7AQ04656 SETDB1-202ENST00000368962 1478 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ATP7AQ04656 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATP7AQ04656 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATP7AQ04656 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC19.3■□□□□ 0.68
ATP7AQ04656 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC19.3■□□□□ 0.68
ATP7AQ04656 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ATP7AQ04656 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
ATP7AQ04656 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATP7AQ04656 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ATP7AQ04656 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC19.29■□□□□ 0.68
ATP7AQ04656 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATP7AQ04656 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ATP7AQ04656 KRT36-201ENST00000328119 1644 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
ATP7AQ04656 FAM45BP-202ENST00000592932 1624 ntBASIC19.29■□□□□ 0.68
ATP7AQ04656 AP002414.2-201ENST00000591780 3365 ntBASIC19.29■□□□□ 0.68
ATP7AQ04656 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC19.29■□□□□ 0.68
ATP7AQ04656 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC19.29■□□□□ 0.68
ATP7AQ04656 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
ATP7AQ04656 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC19.29■□□□□ 0.68
ATP7AQ04656 ST5-258ENST00000534278 1352 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ATP7AQ04656 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC19.29■□□□□ 0.68
ATP7AQ04656 IGLV3-21-201ENST00000390308 602 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
ATP7AQ04656 AC090587.1-201ENST00000415809 494 ntTSL 3 BASIC19.29■□□□□ 0.68
ATP7AQ04656 AC083873.1-201ENST00000421179 1099 ntBASIC19.29■□□□□ 0.68
ATP7AQ04656 AC092100.1-201ENST00000435148 702 ntTSL 3 BASIC19.29■□□□□ 0.68
ATP7AQ04656 ENTPD1-AS1-210ENST00000452942 864 ntTSL 3 BASIC19.29■□□□□ 0.68
ATP7AQ04656 RN7SL43P-201ENST00000463926 291 ntBASIC19.29■□□□□ 0.68
ATP7AQ04656 AC016304.1-201ENST00000476363 413 ntBASIC19.29■□□□□ 0.68
ATP7AQ04656 EGLN3-209ENST00000553215 1004 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ATP7AQ04656 AC011495.2-201ENST00000600665 360 ntTSL 5 BASIC19.29■□□□□ 0.68
ATP7AQ04656 AC091905.3-201ENST00000624959 234 ntBASIC19.29■□□□□ 0.68
ATP7AQ04656 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATP7AQ04656 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
ATP7AQ04656 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ATP7AQ04656 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms