Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 SERPING1-202ENST00000340687 1719 ntTSL 5 BASIC14.78□□□□□ -0.04
CASP4P49662 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC14.78□□□□□ -0.04
CASP4P49662 PTN-202ENST00000393083 1599 ntTSL 5 BASIC14.78□□□□□ -0.04
CASP4P49662 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CASP4P49662 ACER1-201ENST00000301452 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CASP4P49662 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CASP4P49662 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC14.78□□□□□ -0.04
CASP4P49662 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CASP4P49662 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CASP4P49662 ZMAT5-201ENST00000344318 899 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CASP4P49662 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CASP4P49662 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CASP4P49662 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC14.78□□□□□ -0.04
CASP4P49662 LINP1-201ENST00000417112 917 ntTSL 2 BASIC14.78□□□□□ -0.04
CASP4P49662 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC14.78□□□□□ -0.04
CASP4P49662 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CASP4P49662 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC14.78□□□□□ -0.04
CASP4P49662 AC098935.1-201ENST00000446057 611 ntBASIC14.78□□□□□ -0.04
CASP4P49662 C3orf35-206ENST00000452017 513 ntAPPRIS P5 TSL 5 BASIC14.78□□□□□ -0.04
CASP4P49662 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC14.78□□□□□ -0.04
CASP4P49662 AL137779.3-201ENST00000553295 729 ntBASIC14.78□□□□□ -0.04
CASP4P49662 DNM1P51-201ENST00000558149 522 ntBASIC14.78□□□□□ -0.04
CASP4P49662 MT3-202ENST00000561640 514 ntTSL 3 BASIC14.78□□□□□ -0.04
CASP4P49662 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC14.78□□□□□ -0.04
CASP4P49662 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC14.78□□□□□ -0.04
CASP4P49662 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC14.78□□□□□ -0.04
CASP4P49662 AC018635.2-201ENST00000608625 364 ntBASIC14.78□□□□□ -0.04
CASP4P49662 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CASP4P49662 GALNT7-201ENST00000265000 4307 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CASP4P49662 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CASP4P49662 USP5-201ENST00000229268 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CASP4P49662 TCAF2-205ENST00000444908 2976 ntTSL 5 BASIC14.78□□□□□ -0.04
CASP4P49662 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CASP4P49662 AL450468.2-201ENST00000565955 1889 ntBASIC14.78□□□□□ -0.04
CASP4P49662 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CASP4P49662 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CASP4P49662 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CASP4P49662 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CASP4P49662 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
CASP4P49662 Z98257.2-202ENST00000641138 1548 ntBASIC14.77□□□□□ -0.04
CASP4P49662 MICA-210ENST00000616296 2260 ntTSL 5 BASIC14.77□□□□□ -0.04
CASP4P49662 PAK1-215ENST00000530617 3001 ntTSL 2 BASIC14.77□□□□□ -0.04
CASP4P49662 AC092115.1-201ENST00000566277 1402 ntBASIC14.77□□□□□ -0.04
CASP4P49662 AC005154.3-201ENST00000419639 1393 ntBASIC14.77□□□□□ -0.04
CASP4P49662 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC14.77□□□□□ -0.04
CASP4P49662 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CASP4P49662 HSPA8P9-201ENST00000485881 1943 ntBASIC14.77□□□□□ -0.04
CASP4P49662 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CASP4P49662 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CASP4P49662 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CASP4P49662 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CASP4P49662 SNU13-204ENST00000402458 462 ntTSL 3 BASIC14.77□□□□□ -0.05
CASP4P49662 AL662797.1-201ENST00000442852 799 ntTSL 3 BASIC14.77□□□□□ -0.05
CASP4P49662 AC079112.1-201ENST00000454972 939 ntBASIC14.77□□□□□ -0.05
CASP4P49662 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CASP4P49662 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC14.77□□□□□ -0.05
CASP4P49662 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
CASP4P49662 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.77□□□□□ -0.05
CASP4P49662 LINC01623-201ENST00000440244 2458 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CASP4P49662 ITFG1-204ENST00000544001 1849 ntTSL 2 BASIC14.77□□□□□ -0.05
CASP4P49662 TRPC7-202ENST00000378459 2406 ntTSL 5 BASIC14.77□□□□□ -0.05
CASP4P49662 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CASP4P49662 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
CASP4P49662 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
CASP4P49662 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CASP4P49662 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CASP4P49662 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC14.77□□□□□ -0.05
CASP4P49662 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
CASP4P49662 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
CASP4P49662 HAL-202ENST00000538703 2637 ntTSL 2 BASIC14.77□□□□□ -0.05
CASP4P49662 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CASP4P49662 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
CASP4P49662 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC14.76□□□□□ -0.05
CASP4P49662 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CASP4P49662 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CASP4P49662 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CASP4P49662 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CASP4P49662 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CASP4P49662 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
CASP4P49662 PEX1-204ENST00000438045 3329 ntTSL 2 BASIC14.76□□□□□ -0.05
CASP4P49662 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
CASP4P49662 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CASP4P49662 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CASP4P49662 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CASP4P49662 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
CASP4P49662 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC14.76□□□□□ -0.05
CASP4P49662 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CASP4P49662 NDRG2-201ENST00000298684 1784 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CASP4P49662 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CASP4P49662 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CASP4P49662 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CASP4P49662 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CASP4P49662 TRMT1-202ENST00000357720 2142 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
CASP4P49662 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CASP4P49662 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CASP4P49662 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CASP4P49662 CLIC1-209ENST00000395892 1197 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
CASP4P49662 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CASP4P49662 AL357079.1-203ENST00000412378 494 ntTSL 5 BASIC14.76□□□□□ -0.05
CASP4P49662 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms