Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 AC108734.2-201ENST00000420887 1069 ntBASIC16.38■□□□□ 0.21
APPP05067 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC16.38■□□□□ 0.21
APPP05067 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC16.38■□□□□ 0.21
APPP05067 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC16.38■□□□□ 0.21
APPP05067 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC16.38■□□□□ 0.21
APPP05067 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC16.38■□□□□ 0.21
APPP05067 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
APPP05067 AC012087.1-201ENST00000608068 809 ntTSL 5 BASIC16.38■□□□□ 0.21
APPP05067 COQ4-204ENST00000608951 781 ntTSL 2 BASIC16.38■□□□□ 0.21
APPP05067 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
APPP05067 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC16.38■□□□□ 0.21
APPP05067 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
APPP05067 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC16.38■□□□□ 0.21
APPP05067 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
APPP05067 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC16.38■□□□□ 0.21
APPP05067 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC16.38■□□□□ 0.21
APPP05067 CUL2-210ENST00000626172 4115 ntTSL 5 BASIC16.38■□□□□ 0.21
APPP05067 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
APPP05067 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
APPP05067 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
APPP05067 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
APPP05067 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
APPP05067 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
APPP05067 DCAF4-203ENST00000394234 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
APPP05067 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC16.37■□□□□ 0.21
APPP05067 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
APPP05067 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
APPP05067 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
APPP05067 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
APPP05067 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC16.37■□□□□ 0.21
APPP05067 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
APPP05067 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
APPP05067 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
APPP05067 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
APPP05067 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
APPP05067 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
APPP05067 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
APPP05067 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
APPP05067 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
APPP05067 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
APPP05067 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
APPP05067 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
APPP05067 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
APPP05067 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC16.37■□□□□ 0.21
APPP05067 AC079250.1-201ENST00000456046 531 ntBASIC16.37■□□□□ 0.21
APPP05067 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC16.37■□□□□ 0.21
APPP05067 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC16.37■□□□□ 0.21
APPP05067 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC16.37■□□□□ 0.21
APPP05067 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC16.37■□□□□ 0.21
APPP05067 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC16.37■□□□□ 0.21
APPP05067 GMFG-209ENST00000600322 622 ntTSL 5 BASIC16.37■□□□□ 0.21
APPP05067 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC16.37■□□□□ 0.21
APPP05067 OR2I1P-208ENST00000641137 4948 ntBASIC16.37■□□□□ 0.21
APPP05067 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
APPP05067 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
APPP05067 AC105206.1-202ENST00000314927 2368 ntBASIC16.37■□□□□ 0.21
APPP05067 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
APPP05067 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
APPP05067 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
APPP05067 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
APPP05067 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
APPP05067 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC16.37■□□□□ 0.21
APPP05067 AL805961.2-201ENST00000642139 4817 ntBASIC16.36■□□□□ 0.21
APPP05067 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
APPP05067 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC16.36■□□□□ 0.21
APPP05067 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
APPP05067 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
APPP05067 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
APPP05067 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC16.36■□□□□ 0.21
APPP05067 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
APPP05067 ARNTL-202ENST00000401424 2788 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
APPP05067 PTPRVP-205ENST00000641549 5067 ntBASIC16.36■□□□□ 0.21
APPP05067 BAK1P1-201ENST00000317045 636 ntBASIC16.36■□□□□ 0.21
APPP05067 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
APPP05067 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
APPP05067 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
APPP05067 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC16.36■□□□□ 0.21
APPP05067 AC084752.1-201ENST00000509766 622 ntBASIC16.36■□□□□ 0.21
APPP05067 COX5A-205ENST00000568517 582 ntTSL 3 BASIC16.36■□□□□ 0.21
APPP05067 AC132812.1-201ENST00000583145 892 ntBASIC16.36■□□□□ 0.21
APPP05067 AL132780.4-201ENST00000624870 1135 ntBASIC16.36■□□□□ 0.21
APPP05067 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC16.36■□□□□ 0.21
APPP05067 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
APPP05067 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
APPP05067 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
APPP05067 CTBP2P8-201ENST00000422584 1330 ntBASIC16.36■□□□□ 0.21
APPP05067 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC16.36■□□□□ 0.21
APPP05067 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
APPP05067 ATF3-202ENST00000341491 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
APPP05067 FUCA1P1-201ENST00000374476 1351 ntBASIC16.36■□□□□ 0.21
APPP05067 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC16.36■□□□□ 0.21
APPP05067 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC16.36■□□□□ 0.21
APPP05067 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
APPP05067 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
APPP05067 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
APPP05067 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
APPP05067 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC16.36■□□□□ 0.21
APPP05067 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC16.36■□□□□ 0.21
APPP05067 PCDHA6-201ENST00000378126 3267 ntBASIC16.36■□□□□ 0.21
APPP05067 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms