Protein–RNA interactions for Protein: Q9Y6Q6

TNFRSF11A, Tumor necrosis factor receptor superfamily member 11A, humanhuman

Predicted RBP Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11AQ9Y6Q6 AC133637.1-201ENST00000624115 1537 ntBASIC27.41■■□□□ 1.98
TNFRSF11AQ9Y6Q6 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC27.41■■□□□ 1.98
TNFRSF11AQ9Y6Q6 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
TNFRSF11AQ9Y6Q6 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC27.41■■□□□ 1.98
TNFRSF11AQ9Y6Q6 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC27.41■■□□□ 1.98
TNFRSF11AQ9Y6Q6 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC27.41■■□□□ 1.98
TNFRSF11AQ9Y6Q6 EDA-201ENST00000338901 1233 ntBASIC27.41■■□□□ 1.98
TNFRSF11AQ9Y6Q6 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC27.41■■□□□ 1.98
TNFRSF11AQ9Y6Q6 AC010525.1-201ENST00000585559 441 ntBASIC27.41■■□□□ 1.98
TNFRSF11AQ9Y6Q6 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
TNFRSF11AQ9Y6Q6 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC27.4■■□□□ 1.98
TNFRSF11AQ9Y6Q6 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC27.4■■□□□ 1.98
TNFRSF11AQ9Y6Q6 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
TNFRSF11AQ9Y6Q6 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
TNFRSF11AQ9Y6Q6 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC27.4■■□□□ 1.98
TNFRSF11AQ9Y6Q6 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
TNFRSF11AQ9Y6Q6 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
TNFRSF11AQ9Y6Q6 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC27.4■■□□□ 1.98
TNFRSF11AQ9Y6Q6 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC27.4■■□□□ 1.98
TNFRSF11AQ9Y6Q6 AL355001.2-201ENST00000620617 1191 ntBASIC27.4■■□□□ 1.98
TNFRSF11AQ9Y6Q6 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC27.4■■□□□ 1.98
TNFRSF11AQ9Y6Q6 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC27.4■■□□□ 1.98
TNFRSF11AQ9Y6Q6 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
TNFRSF11AQ9Y6Q6 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC27.39■■□□□ 1.98
TNFRSF11AQ9Y6Q6 SNX3-202ENST00000349379 890 ntTSL 2 BASIC27.39■■□□□ 1.98
TNFRSF11AQ9Y6Q6 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC27.39■■□□□ 1.98
TNFRSF11AQ9Y6Q6 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
TNFRSF11AQ9Y6Q6 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
TNFRSF11AQ9Y6Q6 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC27.39■■□□□ 1.97
TNFRSF11AQ9Y6Q6 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
TNFRSF11AQ9Y6Q6 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
TNFRSF11AQ9Y6Q6 ZNRF2P3-201ENST00000424200 374 ntBASIC27.38■■□□□ 1.97
TNFRSF11AQ9Y6Q6 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
TNFRSF11AQ9Y6Q6 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
TNFRSF11AQ9Y6Q6 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
TNFRSF11AQ9Y6Q6 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
TNFRSF11AQ9Y6Q6 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC27.38■■□□□ 1.97
TNFRSF11AQ9Y6Q6 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
TNFRSF11AQ9Y6Q6 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC27.37■■□□□ 1.97
TNFRSF11AQ9Y6Q6 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
TNFRSF11AQ9Y6Q6 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
TNFRSF11AQ9Y6Q6 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
TNFRSF11AQ9Y6Q6 SLC47A1P1-202ENST00000449666 945 ntBASIC27.37■■□□□ 1.97
TNFRSF11AQ9Y6Q6 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC27.37■■□□□ 1.97
TNFRSF11AQ9Y6Q6 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC27.37■■□□□ 1.97
TNFRSF11AQ9Y6Q6 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC27.37■■□□□ 1.97
TNFRSF11AQ9Y6Q6 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC27.37■■□□□ 1.97
TNFRSF11AQ9Y6Q6 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC27.37■■□□□ 1.97
TNFRSF11AQ9Y6Q6 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC27.37■■□□□ 1.97
TNFRSF11AQ9Y6Q6 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC27.37■■□□□ 1.97
TNFRSF11AQ9Y6Q6 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC27.37■■□□□ 1.97
TNFRSF11AQ9Y6Q6 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC27.36■■□□□ 1.97
TNFRSF11AQ9Y6Q6 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC27.36■■□□□ 1.97
TNFRSF11AQ9Y6Q6 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC27.36■■□□□ 1.97
TNFRSF11AQ9Y6Q6 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC27.36■■□□□ 1.97
TNFRSF11AQ9Y6Q6 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
TNFRSF11AQ9Y6Q6 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
TNFRSF11AQ9Y6Q6 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC27.35■■□□□ 1.97
TNFRSF11AQ9Y6Q6 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
TNFRSF11AQ9Y6Q6 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC27.35■■□□□ 1.97
TNFRSF11AQ9Y6Q6 STOX2-205ENST00000513034 807 ntTSL 3 BASIC27.35■■□□□ 1.97
TNFRSF11AQ9Y6Q6 AC142381.2-201ENST00000566120 298 ntBASIC27.35■■□□□ 1.97
TNFRSF11AQ9Y6Q6 AC008764.7-201ENST00000593779 1081 ntBASIC27.35■■□□□ 1.97
TNFRSF11AQ9Y6Q6 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC27.35■■□□□ 1.97
TNFRSF11AQ9Y6Q6 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC27.35■■□□□ 1.97
TNFRSF11AQ9Y6Q6 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
TNFRSF11AQ9Y6Q6 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
TNFRSF11AQ9Y6Q6 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC27.35■■□□□ 1.97
TNFRSF11AQ9Y6Q6 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC27.34■■□□□ 1.97
TNFRSF11AQ9Y6Q6 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
TNFRSF11AQ9Y6Q6 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC27.34■■□□□ 1.97
TNFRSF11AQ9Y6Q6 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
TNFRSF11AQ9Y6Q6 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
TNFRSF11AQ9Y6Q6 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
TNFRSF11AQ9Y6Q6 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC27.34■■□□□ 1.97
TNFRSF11AQ9Y6Q6 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
TNFRSF11AQ9Y6Q6 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
TNFRSF11AQ9Y6Q6 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC27.34■■□□□ 1.97
TNFRSF11AQ9Y6Q6 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
TNFRSF11AQ9Y6Q6 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
TNFRSF11AQ9Y6Q6 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
TNFRSF11AQ9Y6Q6 DUSP8P3-201ENST00000399571 1760 ntBASIC27.33■■□□□ 1.97
TNFRSF11AQ9Y6Q6 EBPL-204ENST00000378272 766 ntTSL 3 BASIC27.33■■□□□ 1.97
TNFRSF11AQ9Y6Q6 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC27.33■■□□□ 1.97
TNFRSF11AQ9Y6Q6 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
TNFRSF11AQ9Y6Q6 C9orf163-202ENST00000624034 2573 ntBASIC27.33■■□□□ 1.97
TNFRSF11AQ9Y6Q6 NFE2L3P1-201ENST00000588207 1959 ntBASIC27.33■■□□□ 1.97
TNFRSF11AQ9Y6Q6 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC27.33■■□□□ 1.96
TNFRSF11AQ9Y6Q6 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC27.32■■□□□ 1.96
TNFRSF11AQ9Y6Q6 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
TNFRSF11AQ9Y6Q6 AC004687.1-201ENST00000579003 1625 ntBASIC27.32■■□□□ 1.96
TNFRSF11AQ9Y6Q6 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC27.32■■□□□ 1.96
TNFRSF11AQ9Y6Q6 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC27.32■■□□□ 1.96
TNFRSF11AQ9Y6Q6 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC27.32■■□□□ 1.96
TNFRSF11AQ9Y6Q6 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC27.32■■□□□ 1.96
TNFRSF11AQ9Y6Q6 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
TNFRSF11AQ9Y6Q6 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC27.32■■□□□ 1.96
TNFRSF11AQ9Y6Q6 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC27.31■■□□□ 1.96
TNFRSF11AQ9Y6Q6 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC27.31■■□□□ 1.96
TNFRSF11AQ9Y6Q6 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms