Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 PARP1-210ENST00000629232 477 ntTSL 5 BASIC25.43■■□□□ 1.66
PTCH2Q9Y6C5 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
PTCH2Q9Y6C5 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
PTCH2Q9Y6C5 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC25.42■■□□□ 1.66
PTCH2Q9Y6C5 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
PTCH2Q9Y6C5 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC25.42■■□□□ 1.66
PTCH2Q9Y6C5 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
PTCH2Q9Y6C5 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
PTCH2Q9Y6C5 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
PTCH2Q9Y6C5 KRT18P6-201ENST00000555540 1265 ntBASIC25.42■■□□□ 1.66
PTCH2Q9Y6C5 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC25.42■■□□□ 1.66
PTCH2Q9Y6C5 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC25.42■■□□□ 1.66
PTCH2Q9Y6C5 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
PTCH2Q9Y6C5 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
PTCH2Q9Y6C5 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
PTCH2Q9Y6C5 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC25.41■■□□□ 1.66
PTCH2Q9Y6C5 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
PTCH2Q9Y6C5 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
PTCH2Q9Y6C5 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
PTCH2Q9Y6C5 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
PTCH2Q9Y6C5 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
PTCH2Q9Y6C5 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
PTCH2Q9Y6C5 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
PTCH2Q9Y6C5 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
PTCH2Q9Y6C5 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC25.41■■□□□ 1.66
PTCH2Q9Y6C5 KRT19P1-201ENST00000405746 1186 ntBASIC25.41■■□□□ 1.66
PTCH2Q9Y6C5 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC25.41■■□□□ 1.66
PTCH2Q9Y6C5 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC25.41■■□□□ 1.66
PTCH2Q9Y6C5 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
PTCH2Q9Y6C5 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC25.4■■□□□ 1.66
PTCH2Q9Y6C5 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC25.4■■□□□ 1.66
PTCH2Q9Y6C5 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
PTCH2Q9Y6C5 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
PTCH2Q9Y6C5 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC25.4■■□□□ 1.66
PTCH2Q9Y6C5 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
PTCH2Q9Y6C5 LSR-205ENST00000427250 1606 ntTSL 2 BASIC25.4■■□□□ 1.66
PTCH2Q9Y6C5 ALDH1A3-203ENST00000557963 1670 ntBASIC25.39■■□□□ 1.66
PTCH2Q9Y6C5 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC25.39■■□□□ 1.66
PTCH2Q9Y6C5 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
PTCH2Q9Y6C5 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
PTCH2Q9Y6C5 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC25.39■■□□□ 1.66
PTCH2Q9Y6C5 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC25.39■■□□□ 1.66
PTCH2Q9Y6C5 MIR4651-201ENST00000582622 73 ntBASIC25.39■■□□□ 1.66
PTCH2Q9Y6C5 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
PTCH2Q9Y6C5 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC25.39■■□□□ 1.65
PTCH2Q9Y6C5 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
PTCH2Q9Y6C5 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC25.38■■□□□ 1.65
PTCH2Q9Y6C5 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
PTCH2Q9Y6C5 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC25.38■■□□□ 1.65
PTCH2Q9Y6C5 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
PTCH2Q9Y6C5 AC093827.2-201ENST00000512654 315 ntBASIC25.38■■□□□ 1.65
PTCH2Q9Y6C5 SPI1-203ENST00000533030 661 ntTSL 2 BASIC25.38■■□□□ 1.65
PTCH2Q9Y6C5 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC25.38■■□□□ 1.65
PTCH2Q9Y6C5 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
PTCH2Q9Y6C5 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
PTCH2Q9Y6C5 AL161729.1-201ENST00000604104 1402 ntBASIC25.37■■□□□ 1.65
PTCH2Q9Y6C5 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PTCH2Q9Y6C5 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
PTCH2Q9Y6C5 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
PTCH2Q9Y6C5 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PTCH2Q9Y6C5 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC25.37■■□□□ 1.65
PTCH2Q9Y6C5 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PTCH2Q9Y6C5 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PTCH2Q9Y6C5 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PTCH2Q9Y6C5 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC25.37■■□□□ 1.65
PTCH2Q9Y6C5 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PTCH2Q9Y6C5 AC092803.2-201ENST00000564287 1899 ntBASIC25.36■■□□□ 1.65
PTCH2Q9Y6C5 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
PTCH2Q9Y6C5 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
PTCH2Q9Y6C5 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
PTCH2Q9Y6C5 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC25.36■■□□□ 1.65
PTCH2Q9Y6C5 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC25.36■■□□□ 1.65
PTCH2Q9Y6C5 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC25.36■■□□□ 1.65
PTCH2Q9Y6C5 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC25.36■■□□□ 1.65
PTCH2Q9Y6C5 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC25.36■■□□□ 1.65
PTCH2Q9Y6C5 KLF13-207ENST00000560473 489 ntTSL 3 BASIC25.36■■□□□ 1.65
PTCH2Q9Y6C5 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC25.36■■□□□ 1.65
PTCH2Q9Y6C5 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC25.36■■□□□ 1.65
PTCH2Q9Y6C5 MDK-213ENST00000617138 635 ntTSL 2 BASIC25.36■■□□□ 1.65
PTCH2Q9Y6C5 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
PTCH2Q9Y6C5 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC25.36■■□□□ 1.65
PTCH2Q9Y6C5 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC25.36■■□□□ 1.65
PTCH2Q9Y6C5 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
PTCH2Q9Y6C5 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
PTCH2Q9Y6C5 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
PTCH2Q9Y6C5 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
PTCH2Q9Y6C5 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
PTCH2Q9Y6C5 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC25.35■■□□□ 1.65
PTCH2Q9Y6C5 DET1-205ENST00000558413 583 ntTSL 4 BASIC25.35■■□□□ 1.65
PTCH2Q9Y6C5 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
PTCH2Q9Y6C5 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC25.35■■□□□ 1.65
PTCH2Q9Y6C5 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
PTCH2Q9Y6C5 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
PTCH2Q9Y6C5 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
PTCH2Q9Y6C5 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
PTCH2Q9Y6C5 KRT18P11-201ENST00000435214 1283 ntBASIC25.34■■□□□ 1.65
PTCH2Q9Y6C5 AL121832.2-201ENST00000610979 668 ntBASIC25.34■■□□□ 1.65
PTCH2Q9Y6C5 AL050303.2-201ENST00000619798 666 ntBASIC25.34■■□□□ 1.65
PTCH2Q9Y6C5 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC25.34■■□□□ 1.65
PTCH2Q9Y6C5 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms