Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC25.43■■□□□ 1.66
CLIC4Q9Y696 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
CLIC4Q9Y696 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC25.42■■□□□ 1.66
CLIC4Q9Y696 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
CLIC4Q9Y696 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
CLIC4Q9Y696 TSPY9P-201ENST00000440215 945 ntBASIC25.42■■□□□ 1.66
CLIC4Q9Y696 TSPY11P-201ENST00000442607 1045 ntBASIC25.42■■□□□ 1.66
CLIC4Q9Y696 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
CLIC4Q9Y696 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
CLIC4Q9Y696 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC25.42■■□□□ 1.66
CLIC4Q9Y696 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC25.42■■□□□ 1.66
CLIC4Q9Y696 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC25.42■■□□□ 1.66
CLIC4Q9Y696 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
CLIC4Q9Y696 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC25.42■■□□□ 1.66
CLIC4Q9Y696 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CLIC4Q9Y696 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CLIC4Q9Y696 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
CLIC4Q9Y696 LINC00526-201ENST00000581067 1875 ntBASIC25.41■■□□□ 1.66
CLIC4Q9Y696 LINC01529-204ENST00000636474 1715 ntBASIC25.41■■□□□ 1.66
CLIC4Q9Y696 LSM4-201ENST00000252816 986 ntTSL 2 BASIC25.41■■□□□ 1.66
CLIC4Q9Y696 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC25.41■■□□□ 1.66
CLIC4Q9Y696 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CLIC4Q9Y696 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
CLIC4Q9Y696 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC25.41■■□□□ 1.66
CLIC4Q9Y696 AC009102.2-201ENST00000606772 1639 ntBASIC25.41■■□□□ 1.66
CLIC4Q9Y696 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
CLIC4Q9Y696 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
CLIC4Q9Y696 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC25.41■■□□□ 1.66
CLIC4Q9Y696 ECEL1P1-201ENST00000373592 1742 ntBASIC25.4■■□□□ 1.66
CLIC4Q9Y696 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
CLIC4Q9Y696 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
CLIC4Q9Y696 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
CLIC4Q9Y696 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
CLIC4Q9Y696 AC010997.5-201ENST00000609182 354 ntBASIC25.4■■□□□ 1.66
CLIC4Q9Y696 ESRRAP2-201ENST00000418437 1549 ntBASIC25.4■■□□□ 1.66
CLIC4Q9Y696 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CLIC4Q9Y696 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
CLIC4Q9Y696 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC25.4■■□□□ 1.66
CLIC4Q9Y696 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
CLIC4Q9Y696 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
CLIC4Q9Y696 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC25.39■■□□□ 1.66
CLIC4Q9Y696 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
CLIC4Q9Y696 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
CLIC4Q9Y696 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC25.39■■□□□ 1.66
CLIC4Q9Y696 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC25.39■■□□□ 1.66
CLIC4Q9Y696 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
CLIC4Q9Y696 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
CLIC4Q9Y696 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC25.39■■□□□ 1.65
CLIC4Q9Y696 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
CLIC4Q9Y696 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC25.38■■□□□ 1.65
CLIC4Q9Y696 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
CLIC4Q9Y696 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
CLIC4Q9Y696 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC25.38■■□□□ 1.65
CLIC4Q9Y696 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CLIC4Q9Y696 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CLIC4Q9Y696 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
CLIC4Q9Y696 NKILA-201ENST00000613231 537 ntTSL 4 BASIC25.38■■□□□ 1.65
CLIC4Q9Y696 EXOG-217ENST00000630638 197 ntTSL 5 BASIC25.38■■□□□ 1.65
CLIC4Q9Y696 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CLIC4Q9Y696 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CLIC4Q9Y696 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CLIC4Q9Y696 FP325331.1-202ENST00000623531 1380 ntBASIC25.37■■□□□ 1.65
CLIC4Q9Y696 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CLIC4Q9Y696 LINC00565-201ENST00000562710 2331 ntBASIC25.37■■□□□ 1.65
CLIC4Q9Y696 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
CLIC4Q9Y696 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CLIC4Q9Y696 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC25.37■■□□□ 1.65
CLIC4Q9Y696 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CLIC4Q9Y696 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CLIC4Q9Y696 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CLIC4Q9Y696 CREM-229ENST00000474362 1030 ntTSL 2 BASIC25.36■■□□□ 1.65
CLIC4Q9Y696 UNC93B8-201ENST00000511903 705 ntBASIC25.36■■□□□ 1.65
CLIC4Q9Y696 AC087742.1-201ENST00000575880 1738 ntBASIC25.36■■□□□ 1.65
CLIC4Q9Y696 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC25.36■■□□□ 1.65
CLIC4Q9Y696 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC25.36■■□□□ 1.65
CLIC4Q9Y696 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC25.36■■□□□ 1.65
CLIC4Q9Y696 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CLIC4Q9Y696 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CLIC4Q9Y696 AC127496.7-201ENST00000625110 1798 ntBASIC25.36■■□□□ 1.65
CLIC4Q9Y696 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC25.36■■□□□ 1.65
CLIC4Q9Y696 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC25.36■■□□□ 1.65
CLIC4Q9Y696 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CLIC4Q9Y696 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
CLIC4Q9Y696 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CLIC4Q9Y696 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
CLIC4Q9Y696 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC25.35■■□□□ 1.65
CLIC4Q9Y696 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
CLIC4Q9Y696 TFPT-201ENST00000391757 774 ntTSL 5 BASIC25.35■■□□□ 1.65
CLIC4Q9Y696 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
CLIC4Q9Y696 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
CLIC4Q9Y696 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
CLIC4Q9Y696 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
CLIC4Q9Y696 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CLIC4Q9Y696 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC25.35■■□□□ 1.65
CLIC4Q9Y696 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CLIC4Q9Y696 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
CLIC4Q9Y696 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CLIC4Q9Y696 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
CLIC4Q9Y696 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
CLIC4Q9Y696 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms