Protein–RNA interactions for Protein: Q9Y5H9

PCDHA2, Protocadherin alpha-2, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA2Q9Y5H9 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC24.99■■□□□ 1.59
PCDHA2Q9Y5H9 AC008764.7-201ENST00000593779 1081 ntBASIC24.99■■□□□ 1.59
PCDHA2Q9Y5H9 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
PCDHA2Q9Y5H9 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
PCDHA2Q9Y5H9 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC24.99■■□□□ 1.59
PCDHA2Q9Y5H9 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
PCDHA2Q9Y5H9 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
PCDHA2Q9Y5H9 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
PCDHA2Q9Y5H9 AC026271.2-201ENST00000428091 497 ntBASIC24.98■■□□□ 1.59
PCDHA2Q9Y5H9 RBM38-205ENST00000440234 686 ntTSL 2 BASIC24.98■■□□□ 1.59
PCDHA2Q9Y5H9 STOX2-205ENST00000513034 807 ntTSL 3 BASIC24.98■■□□□ 1.59
PCDHA2Q9Y5H9 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC24.98■■□□□ 1.59
PCDHA2Q9Y5H9 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC24.98■■□□□ 1.59
PCDHA2Q9Y5H9 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
PCDHA2Q9Y5H9 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
PCDHA2Q9Y5H9 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
PCDHA2Q9Y5H9 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
PCDHA2Q9Y5H9 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
PCDHA2Q9Y5H9 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC24.97■■□□□ 1.59
PCDHA2Q9Y5H9 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC24.97■■□□□ 1.59
PCDHA2Q9Y5H9 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
PCDHA2Q9Y5H9 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC24.97■■□□□ 1.59
PCDHA2Q9Y5H9 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC24.97■■□□□ 1.59
PCDHA2Q9Y5H9 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC24.97■■□□□ 1.59
PCDHA2Q9Y5H9 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
PCDHA2Q9Y5H9 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC24.96■■□□□ 1.59
PCDHA2Q9Y5H9 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
PCDHA2Q9Y5H9 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC24.96■■□□□ 1.59
PCDHA2Q9Y5H9 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC24.96■■□□□ 1.59
PCDHA2Q9Y5H9 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
PCDHA2Q9Y5H9 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC24.96■■□□□ 1.59
PCDHA2Q9Y5H9 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
PCDHA2Q9Y5H9 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC24.96■■□□□ 1.59
PCDHA2Q9Y5H9 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
PCDHA2Q9Y5H9 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
PCDHA2Q9Y5H9 GTSE1-AS1-202ENST00000623117 1518 ntBASIC24.96■■□□□ 1.59
PCDHA2Q9Y5H9 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC24.95■■□□□ 1.59
PCDHA2Q9Y5H9 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC24.95■■□□□ 1.59
PCDHA2Q9Y5H9 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
PCDHA2Q9Y5H9 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC24.95■■□□□ 1.58
PCDHA2Q9Y5H9 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
PCDHA2Q9Y5H9 AC099791.1-201ENST00000416440 715 ntBASIC24.95■■□□□ 1.58
PCDHA2Q9Y5H9 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
PCDHA2Q9Y5H9 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC24.95■■□□□ 1.58
PCDHA2Q9Y5H9 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC24.95■■□□□ 1.58
PCDHA2Q9Y5H9 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
PCDHA2Q9Y5H9 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC24.95■■□□□ 1.58
PCDHA2Q9Y5H9 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.58
PCDHA2Q9Y5H9 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
PCDHA2Q9Y5H9 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
PCDHA2Q9Y5H9 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC24.94■■□□□ 1.58
PCDHA2Q9Y5H9 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC24.94■■□□□ 1.58
PCDHA2Q9Y5H9 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
PCDHA2Q9Y5H9 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC24.94■■□□□ 1.58
PCDHA2Q9Y5H9 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC24.94■■□□□ 1.58
PCDHA2Q9Y5H9 AC233992.3-201ENST00000607491 485 ntBASIC24.94■■□□□ 1.58
PCDHA2Q9Y5H9 pRNA.6-201ENST00000610482 90 ntBASIC24.94■■□□□ 1.58
PCDHA2Q9Y5H9 pRNA.5-201ENST00000612139 90 ntBASIC24.94■■□□□ 1.58
PCDHA2Q9Y5H9 pRNA.11-201ENST00000618423 90 ntBASIC24.94■■□□□ 1.58
PCDHA2Q9Y5H9 pRNA.13-201ENST00000619112 90 ntBASIC24.94■■□□□ 1.58
PCDHA2Q9Y5H9 DUSP8P3-201ENST00000399571 1760 ntBASIC24.94■■□□□ 1.58
PCDHA2Q9Y5H9 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
PCDHA2Q9Y5H9 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
PCDHA2Q9Y5H9 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC24.93■■□□□ 1.58
PCDHA2Q9Y5H9 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
PCDHA2Q9Y5H9 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
PCDHA2Q9Y5H9 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
PCDHA2Q9Y5H9 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
PCDHA2Q9Y5H9 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
PCDHA2Q9Y5H9 BX842568.3-201ENST00000418104 571 ntBASIC24.93■■□□□ 1.58
PCDHA2Q9Y5H9 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
PCDHA2Q9Y5H9 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
PCDHA2Q9Y5H9 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC24.93■■□□□ 1.58
PCDHA2Q9Y5H9 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
PCDHA2Q9Y5H9 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
PCDHA2Q9Y5H9 AC079630.1-202ENST00000618127 1840 ntBASIC24.93■■□□□ 1.58
PCDHA2Q9Y5H9 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
PCDHA2Q9Y5H9 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
PCDHA2Q9Y5H9 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
PCDHA2Q9Y5H9 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
PCDHA2Q9Y5H9 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
PCDHA2Q9Y5H9 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
PCDHA2Q9Y5H9 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC24.92■■□□□ 1.58
PCDHA2Q9Y5H9 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC24.92■■□□□ 1.58
PCDHA2Q9Y5H9 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
PCDHA2Q9Y5H9 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
PCDHA2Q9Y5H9 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC24.92■■□□□ 1.58
PCDHA2Q9Y5H9 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
PCDHA2Q9Y5H9 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC24.91■■□□□ 1.58
PCDHA2Q9Y5H9 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC24.91■■□□□ 1.58
PCDHA2Q9Y5H9 ASB1-202ENST00000409297 878 ntTSL 5 BASIC24.91■■□□□ 1.58
PCDHA2Q9Y5H9 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC24.91■■□□□ 1.58
PCDHA2Q9Y5H9 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
PCDHA2Q9Y5H9 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC24.9■■□□□ 1.58
PCDHA2Q9Y5H9 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC24.9■■□□□ 1.58
PCDHA2Q9Y5H9 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
PCDHA2Q9Y5H9 SNX3-202ENST00000349379 890 ntTSL 2 BASIC24.9■■□□□ 1.58
PCDHA2Q9Y5H9 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC24.9■■□□□ 1.58
PCDHA2Q9Y5H9 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
PCDHA2Q9Y5H9 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 348.8 ms