Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC22.47■■□□□ 1.19
PCDHGC4Q9Y5F7 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHGC4Q9Y5F7 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHGC4Q9Y5F7 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC22.46■■□□□ 1.19
PCDHGC4Q9Y5F7 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHGC4Q9Y5F7 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
PCDHGC4Q9Y5F7 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHGC4Q9Y5F7 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHGC4Q9Y5F7 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
PCDHGC4Q9Y5F7 AL499627.2-201ENST00000606283 725 ntBASIC22.46■■□□□ 1.19
PCDHGC4Q9Y5F7 SF1-220ENST00000626028 704 ntTSL 2 BASIC22.46■■□□□ 1.19
PCDHGC4Q9Y5F7 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHGC4Q9Y5F7 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC22.46■■□□□ 1.19
PCDHGC4Q9Y5F7 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC22.46■■□□□ 1.19
PCDHGC4Q9Y5F7 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
PCDHGC4Q9Y5F7 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
PCDHGC4Q9Y5F7 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHGC4Q9Y5F7 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC22.45■■□□□ 1.18
PCDHGC4Q9Y5F7 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHGC4Q9Y5F7 HES6-206ENST00000409574 738 ntTSL 2 BASIC22.45■■□□□ 1.18
PCDHGC4Q9Y5F7 PBX2P1-201ENST00000493219 1291 ntBASIC22.45■■□□□ 1.18
PCDHGC4Q9Y5F7 AC024257.2-201ENST00000549699 147 ntBASIC22.45■■□□□ 1.18
PCDHGC4Q9Y5F7 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC22.45■■□□□ 1.18
PCDHGC4Q9Y5F7 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.45■■□□□ 1.18
PCDHGC4Q9Y5F7 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHGC4Q9Y5F7 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHGC4Q9Y5F7 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC22.45■■□□□ 1.18
PCDHGC4Q9Y5F7 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHGC4Q9Y5F7 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHGC4Q9Y5F7 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHGC4Q9Y5F7 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHGC4Q9Y5F7 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHGC4Q9Y5F7 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHGC4Q9Y5F7 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC22.44■■□□□ 1.18
PCDHGC4Q9Y5F7 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHGC4Q9Y5F7 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHGC4Q9Y5F7 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHGC4Q9Y5F7 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHGC4Q9Y5F7 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC22.44■■□□□ 1.18
PCDHGC4Q9Y5F7 AL139246.5-201ENST00000606645 996 ntBASIC22.44■■□□□ 1.18
PCDHGC4Q9Y5F7 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC22.44■■□□□ 1.18
PCDHGC4Q9Y5F7 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHGC4Q9Y5F7 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHGC4Q9Y5F7 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHGC4Q9Y5F7 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHGC4Q9Y5F7 AC135279.3-201ENST00000610945 1311 ntBASIC22.43■■□□□ 1.18
PCDHGC4Q9Y5F7 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHGC4Q9Y5F7 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
PCDHGC4Q9Y5F7 AL138724.1-201ENST00000606771 1088 ntBASIC22.43■■□□□ 1.18
PCDHGC4Q9Y5F7 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHGC4Q9Y5F7 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC22.43■■□□□ 1.18
PCDHGC4Q9Y5F7 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHGC4Q9Y5F7 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHGC4Q9Y5F7 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHGC4Q9Y5F7 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
PCDHGC4Q9Y5F7 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHGC4Q9Y5F7 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC22.42■■□□□ 1.18
PCDHGC4Q9Y5F7 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHGC4Q9Y5F7 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC22.42■■□□□ 1.18
PCDHGC4Q9Y5F7 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC22.42■■□□□ 1.18
PCDHGC4Q9Y5F7 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHGC4Q9Y5F7 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC22.42■■□□□ 1.18
PCDHGC4Q9Y5F7 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHGC4Q9Y5F7 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC22.42■■□□□ 1.18
PCDHGC4Q9Y5F7 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHGC4Q9Y5F7 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC22.42■■□□□ 1.18
PCDHGC4Q9Y5F7 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHGC4Q9Y5F7 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHGC4Q9Y5F7 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHGC4Q9Y5F7 AC133637.1-201ENST00000624115 1537 ntBASIC22.41■■□□□ 1.18
PCDHGC4Q9Y5F7 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC22.41■■□□□ 1.18
PCDHGC4Q9Y5F7 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC22.41■■□□□ 1.18
PCDHGC4Q9Y5F7 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC22.41■■□□□ 1.18
PCDHGC4Q9Y5F7 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
PCDHGC4Q9Y5F7 AC011298.3-201ENST00000615796 283 ntBASIC22.41■■□□□ 1.18
PCDHGC4Q9Y5F7 AC106739.1-201ENST00000617035 715 ntBASIC22.41■■□□□ 1.18
PCDHGC4Q9Y5F7 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC22.41■■□□□ 1.18
PCDHGC4Q9Y5F7 RALB-208ENST00000631312 311 ntTSL 5 BASIC22.41■■□□□ 1.18
PCDHGC4Q9Y5F7 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHGC4Q9Y5F7 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHGC4Q9Y5F7 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHGC4Q9Y5F7 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
PCDHGC4Q9Y5F7 C9orf163-202ENST00000624034 2573 ntBASIC22.41■■□□□ 1.18
PCDHGC4Q9Y5F7 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHGC4Q9Y5F7 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHGC4Q9Y5F7 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC22.4■■□□□ 1.18
PCDHGC4Q9Y5F7 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
PCDHGC4Q9Y5F7 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
PCDHGC4Q9Y5F7 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHGC4Q9Y5F7 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHGC4Q9Y5F7 PTMA-205ENST00000410064 814 ntTSL 2 BASIC22.4■■□□□ 1.18
PCDHGC4Q9Y5F7 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC22.4■■□□□ 1.18
PCDHGC4Q9Y5F7 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC22.4■■□□□ 1.18
PCDHGC4Q9Y5F7 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHGC4Q9Y5F7 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHGC4Q9Y5F7 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHGC4Q9Y5F7 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
PCDHGC4Q9Y5F7 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.18
PCDHGC4Q9Y5F7 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
PCDHGC4Q9Y5F7 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC22.39■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms