Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21■□□□□ 0.95
AP4S1Q9Y587 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
AP4S1Q9Y587 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
AP4S1Q9Y587 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
AP4S1Q9Y587 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21■□□□□ 0.95
AP4S1Q9Y587 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
AP4S1Q9Y587 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
AP4S1Q9Y587 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
AP4S1Q9Y587 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
AP4S1Q9Y587 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.99■□□□□ 0.95
AP4S1Q9Y587 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
AP4S1Q9Y587 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
AP4S1Q9Y587 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
AP4S1Q9Y587 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
AP4S1Q9Y587 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.99■□□□□ 0.95
AP4S1Q9Y587 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
AP4S1Q9Y587 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
AP4S1Q9Y587 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
AP4S1Q9Y587 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
AP4S1Q9Y587 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
AP4S1Q9Y587 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
AP4S1Q9Y587 RPS2P35-201ENST00000443417 897 ntBASIC20.98■□□□□ 0.95
AP4S1Q9Y587 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.98■□□□□ 0.95
AP4S1Q9Y587 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
AP4S1Q9Y587 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
AP4S1Q9Y587 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
AP4S1Q9Y587 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
AP4S1Q9Y587 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.97■□□□□ 0.95
AP4S1Q9Y587 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.97■□□□□ 0.95
AP4S1Q9Y587 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
AP4S1Q9Y587 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
AP4S1Q9Y587 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
AP4S1Q9Y587 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
AP4S1Q9Y587 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.97■□□□□ 0.95
AP4S1Q9Y587 AC016575.1-201ENST00000607026 382 ntBASIC20.97■□□□□ 0.95
AP4S1Q9Y587 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
AP4S1Q9Y587 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
AP4S1Q9Y587 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
AP4S1Q9Y587 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.96■□□□□ 0.95
AP4S1Q9Y587 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
AP4S1Q9Y587 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
AP4S1Q9Y587 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
AP4S1Q9Y587 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
AP4S1Q9Y587 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.96■□□□□ 0.95
AP4S1Q9Y587 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.96■□□□□ 0.95
AP4S1Q9Y587 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
AP4S1Q9Y587 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
AP4S1Q9Y587 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
AP4S1Q9Y587 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
AP4S1Q9Y587 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
AP4S1Q9Y587 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
AP4S1Q9Y587 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
AP4S1Q9Y587 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
AP4S1Q9Y587 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
AP4S1Q9Y587 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
AP4S1Q9Y587 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
AP4S1Q9Y587 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
AP4S1Q9Y587 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
AP4S1Q9Y587 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
AP4S1Q9Y587 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.95■□□□□ 0.94
AP4S1Q9Y587 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
AP4S1Q9Y587 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
AP4S1Q9Y587 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
AP4S1Q9Y587 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
AP4S1Q9Y587 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
AP4S1Q9Y587 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
AP4S1Q9Y587 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
AP4S1Q9Y587 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
AP4S1Q9Y587 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
AP4S1Q9Y587 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
AP4S1Q9Y587 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
AP4S1Q9Y587 AL121603.2-201ENST00000557373 2117 ntBASIC20.95■□□□□ 0.94
AP4S1Q9Y587 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
AP4S1Q9Y587 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.94■□□□□ 0.94
AP4S1Q9Y587 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
AP4S1Q9Y587 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
AP4S1Q9Y587 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
AP4S1Q9Y587 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
AP4S1Q9Y587 AL592295.1-201ENST00000400984 884 ntBASIC20.94■□□□□ 0.94
AP4S1Q9Y587 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
AP4S1Q9Y587 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
AP4S1Q9Y587 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
AP4S1Q9Y587 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
AP4S1Q9Y587 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
AP4S1Q9Y587 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
AP4S1Q9Y587 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
AP4S1Q9Y587 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
AP4S1Q9Y587 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.94■□□□□ 0.94
AP4S1Q9Y587 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
AP4S1Q9Y587 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.93■□□□□ 0.94
AP4S1Q9Y587 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
AP4S1Q9Y587 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
AP4S1Q9Y587 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
AP4S1Q9Y587 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
AP4S1Q9Y587 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
AP4S1Q9Y587 AC131274.2-201ENST00000580697 1507 ntBASIC20.93■□□□□ 0.94
AP4S1Q9Y587 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
AP4S1Q9Y587 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
AP4S1Q9Y587 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
AP4S1Q9Y587 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms