Protein–RNA interactions for Protein: Q9Y4X3

CCL27, C-C motif chemokine 27, humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL27Q9Y4X3 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.33■■□□□ 1.01
CCL27Q9Y4X3 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.33■■□□□ 1.01
CCL27Q9Y4X3 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCL27Q9Y4X3 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CCL27Q9Y4X3 AC139530.1-201ENST00000575312 1977 ntBASIC21.33■■□□□ 1.01
CCL27Q9Y4X3 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.33■■□□□ 1
CCL27Q9Y4X3 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.33■■□□□ 1
CCL27Q9Y4X3 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.33■■□□□ 1
CCL27Q9Y4X3 CLDN5-201ENST00000403084 2357 ntBASIC21.32■■□□□ 1
CCL27Q9Y4X3 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.32■■□□□ 1
CCL27Q9Y4X3 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.32■■□□□ 1
CCL27Q9Y4X3 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CCL27Q9Y4X3 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.32■■□□□ 1
CCL27Q9Y4X3 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.32■■□□□ 1
CCL27Q9Y4X3 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.32■■□□□ 1
CCL27Q9Y4X3 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCL27Q9Y4X3 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCL27Q9Y4X3 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.32■■□□□ 1
CCL27Q9Y4X3 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.32■■□□□ 1
CCL27Q9Y4X3 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.32■■□□□ 1
CCL27Q9Y4X3 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.32■■□□□ 1
CCL27Q9Y4X3 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
CCL27Q9Y4X3 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.32■■□□□ 1
CCL27Q9Y4X3 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CCL27Q9Y4X3 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCL27Q9Y4X3 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCL27Q9Y4X3 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCL27Q9Y4X3 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCL27Q9Y4X3 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCL27Q9Y4X3 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCL27Q9Y4X3 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.31■■□□□ 1
CCL27Q9Y4X3 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCL27Q9Y4X3 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCL27Q9Y4X3 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCL27Q9Y4X3 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.31■■□□□ 1
CCL27Q9Y4X3 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCL27Q9Y4X3 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.31■■□□□ 1
CCL27Q9Y4X3 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.31■■□□□ 1
CCL27Q9Y4X3 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CCL27Q9Y4X3 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
CCL27Q9Y4X3 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.3■■□□□ 1
CCL27Q9Y4X3 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CCL27Q9Y4X3 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.3■■□□□ 1
CCL27Q9Y4X3 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CCL27Q9Y4X3 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CCL27Q9Y4X3 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
CCL27Q9Y4X3 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.3■■□□□ 1
CCL27Q9Y4X3 Z92544.1-202ENST00000571933 1220 ntBASIC21.3■■□□□ 1
CCL27Q9Y4X3 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.3■■□□□ 1
CCL27Q9Y4X3 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CCL27Q9Y4X3 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.3■■□□□ 1
CCL27Q9Y4X3 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.3■■□□□ 1
CCL27Q9Y4X3 AC080038.3-201ENST00000623346 1952 ntBASIC21.3■■□□□ 1
CCL27Q9Y4X3 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
CCL27Q9Y4X3 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
CCL27Q9Y4X3 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CCL27Q9Y4X3 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CCL27Q9Y4X3 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.29■■□□□ 1
CCL27Q9Y4X3 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
CCL27Q9Y4X3 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
CCL27Q9Y4X3 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCL27Q9Y4X3 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.29■■□□□ 1
CCL27Q9Y4X3 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.29■■□□□ 1
CCL27Q9Y4X3 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.29■■□□□ 1
CCL27Q9Y4X3 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCL27Q9Y4X3 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
CCL27Q9Y4X3 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
CCL27Q9Y4X3 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCL27Q9Y4X3 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCL27Q9Y4X3 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CCL27Q9Y4X3 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CCL27Q9Y4X3 DUX4L4-201ENST00000566884 1269 ntBASIC21.28■■□□□ 1
CCL27Q9Y4X3 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
CCL27Q9Y4X3 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.28■■□□□ 1
CCL27Q9Y4X3 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.28■■□□□ 1
CCL27Q9Y4X3 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.28■■□□□ 1
CCL27Q9Y4X3 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
CCL27Q9Y4X3 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCL27Q9Y4X3 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.28■■□□□ 1
CCL27Q9Y4X3 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.28■■□□□ 1
CCL27Q9Y4X3 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCL27Q9Y4X3 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.28■■□□□ 1
CCL27Q9Y4X3 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CCL27Q9Y4X3 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CCL27Q9Y4X3 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCL27Q9Y4X3 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
CCL27Q9Y4X3 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.27■■□□□ 1
CCL27Q9Y4X3 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.27■■□□□ 1
CCL27Q9Y4X3 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCL27Q9Y4X3 AC009102.2-201ENST00000606772 1639 ntBASIC21.27■■□□□ 1
CCL27Q9Y4X3 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.27■■□□□ 1
CCL27Q9Y4X3 RARRES2P1-201ENST00000474487 481 ntBASIC21.27■■□□□ 1
CCL27Q9Y4X3 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC21.27■■□□□ 1
CCL27Q9Y4X3 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
CCL27Q9Y4X3 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.27■■□□□ 1
CCL27Q9Y4X3 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.27■■□□□ 1
CCL27Q9Y4X3 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCL27Q9Y4X3 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
CCL27Q9Y4X3 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CCL27Q9Y4X3 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms