Protein–RNA interactions for Protein: Q9Y333

LSM2, U6 snRNA-associated Sm-like protein LSm2, humanhuman

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2Q9Y333 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.8■□□□□ 0.76
LSM2Q9Y333 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LSM2Q9Y333 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
LSM2Q9Y333 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LSM2Q9Y333 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
LSM2Q9Y333 AC133552.2-201ENST00000619106 1032 ntBASIC19.8■□□□□ 0.76
LSM2Q9Y333 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
LSM2Q9Y333 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LSM2Q9Y333 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.8■□□□□ 0.76
LSM2Q9Y333 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LSM2Q9Y333 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LSM2Q9Y333 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LSM2Q9Y333 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
LSM2Q9Y333 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LSM2Q9Y333 AC011551.1-201ENST00000614101 683 ntBASIC19.79■□□□□ 0.76
LSM2Q9Y333 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
LSM2Q9Y333 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
LSM2Q9Y333 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.79■□□□□ 0.76
LSM2Q9Y333 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LSM2Q9Y333 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
LSM2Q9Y333 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LSM2Q9Y333 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.78■□□□□ 0.76
LSM2Q9Y333 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LSM2Q9Y333 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LSM2Q9Y333 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
LSM2Q9Y333 SPCS2P3-201ENST00000500401 656 ntBASIC19.78■□□□□ 0.76
LSM2Q9Y333 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.78■□□□□ 0.76
LSM2Q9Y333 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
LSM2Q9Y333 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.78■□□□□ 0.76
LSM2Q9Y333 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.78■□□□□ 0.76
LSM2Q9Y333 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LSM2Q9Y333 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
LSM2Q9Y333 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
LSM2Q9Y333 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
LSM2Q9Y333 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LSM2Q9Y333 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
LSM2Q9Y333 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
LSM2Q9Y333 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.77■□□□□ 0.76
LSM2Q9Y333 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
LSM2Q9Y333 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
LSM2Q9Y333 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.77■□□□□ 0.75
LSM2Q9Y333 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
LSM2Q9Y333 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
LSM2Q9Y333 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
LSM2Q9Y333 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
LSM2Q9Y333 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LSM2Q9Y333 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LSM2Q9Y333 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LSM2Q9Y333 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LSM2Q9Y333 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LSM2Q9Y333 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LSM2Q9Y333 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LSM2Q9Y333 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LSM2Q9Y333 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
LSM2Q9Y333 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LSM2Q9Y333 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LSM2Q9Y333 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LSM2Q9Y333 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.75■□□□□ 0.75
LSM2Q9Y333 HES4-202ENST00000428771 1040 ntTSL 2 BASIC19.75■□□□□ 0.75
LSM2Q9Y333 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.75■□□□□ 0.75
LSM2Q9Y333 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LSM2Q9Y333 AC018755.3-202ENST00000596210 929 ntBASIC19.75■□□□□ 0.75
LSM2Q9Y333 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
LSM2Q9Y333 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.75■□□□□ 0.75
LSM2Q9Y333 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
LSM2Q9Y333 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LSM2Q9Y333 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
LSM2Q9Y333 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LSM2Q9Y333 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.75■□□□□ 0.75
LSM2Q9Y333 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LSM2Q9Y333 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
LSM2Q9Y333 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LSM2Q9Y333 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.74■□□□□ 0.75
LSM2Q9Y333 AC073130.3-201ENST00000624389 2278 ntBASIC19.74■□□□□ 0.75
LSM2Q9Y333 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LSM2Q9Y333 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19.74■□□□□ 0.75
LSM2Q9Y333 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LSM2Q9Y333 MIR639-201ENST00000384974 98 ntBASIC19.74■□□□□ 0.75
LSM2Q9Y333 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LSM2Q9Y333 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.74■□□□□ 0.75
LSM2Q9Y333 AC005229.4-201ENST00000610085 2198 ntBASIC19.74■□□□□ 0.75
LSM2Q9Y333 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.74■□□□□ 0.75
LSM2Q9Y333 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LSM2Q9Y333 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LSM2Q9Y333 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LSM2Q9Y333 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LSM2Q9Y333 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.73■□□□□ 0.75
LSM2Q9Y333 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LSM2Q9Y333 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
LSM2Q9Y333 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.72■□□□□ 0.75
LSM2Q9Y333 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LSM2Q9Y333 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
LSM2Q9Y333 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
LSM2Q9Y333 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LSM2Q9Y333 LONRF2P2-201ENST00000439212 571 ntBASIC19.72■□□□□ 0.75
LSM2Q9Y333 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.72■□□□□ 0.75
LSM2Q9Y333 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
LSM2Q9Y333 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.71■□□□□ 0.75
LSM2Q9Y333 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
LSM2Q9Y333 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms