Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
NPIPA1Q9UND3 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.43■□□□□ 0.86
NPIPA1Q9UND3 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.43■□□□□ 0.86
NPIPA1Q9UND3 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
NPIPA1Q9UND3 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
NPIPA1Q9UND3 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NPIPA1Q9UND3 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.43■□□□□ 0.86
NPIPA1Q9UND3 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.42■□□□□ 0.86
NPIPA1Q9UND3 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
NPIPA1Q9UND3 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
NPIPA1Q9UND3 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
NPIPA1Q9UND3 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
NPIPA1Q9UND3 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NPIPA1Q9UND3 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NPIPA1Q9UND3 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.42■□□□□ 0.86
NPIPA1Q9UND3 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.42■□□□□ 0.86
NPIPA1Q9UND3 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NPIPA1Q9UND3 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
NPIPA1Q9UND3 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.42■□□□□ 0.86
NPIPA1Q9UND3 AC233992.3-201ENST00000607491 485 ntBASIC20.42■□□□□ 0.86
NPIPA1Q9UND3 pRNA.6-201ENST00000610482 90 ntBASIC20.42■□□□□ 0.86
NPIPA1Q9UND3 pRNA.5-201ENST00000612139 90 ntBASIC20.42■□□□□ 0.86
NPIPA1Q9UND3 pRNA.11-201ENST00000618423 90 ntBASIC20.42■□□□□ 0.86
NPIPA1Q9UND3 pRNA.13-201ENST00000619112 90 ntBASIC20.42■□□□□ 0.86
NPIPA1Q9UND3 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
NPIPA1Q9UND3 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NPIPA1Q9UND3 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
NPIPA1Q9UND3 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.41■□□□□ 0.86
NPIPA1Q9UND3 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
NPIPA1Q9UND3 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NPIPA1Q9UND3 IRS3P-201ENST00000223076 1006 ntBASIC20.41■□□□□ 0.86
NPIPA1Q9UND3 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NPIPA1Q9UND3 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NPIPA1Q9UND3 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.41■□□□□ 0.86
NPIPA1Q9UND3 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NPIPA1Q9UND3 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NPIPA1Q9UND3 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
NPIPA1Q9UND3 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NPIPA1Q9UND3 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NPIPA1Q9UND3 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NPIPA1Q9UND3 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NPIPA1Q9UND3 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
NPIPA1Q9UND3 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.4■□□□□ 0.86
NPIPA1Q9UND3 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.4■□□□□ 0.86
NPIPA1Q9UND3 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.4■□□□□ 0.86
NPIPA1Q9UND3 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.4■□□□□ 0.86
NPIPA1Q9UND3 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.4■□□□□ 0.86
NPIPA1Q9UND3 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
NPIPA1Q9UND3 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.39■□□□□ 0.86
NPIPA1Q9UND3 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
NPIPA1Q9UND3 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
NPIPA1Q9UND3 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NPIPA1Q9UND3 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NPIPA1Q9UND3 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
NPIPA1Q9UND3 BX842568.3-201ENST00000418104 571 ntBASIC20.39■□□□□ 0.85
NPIPA1Q9UND3 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.39■□□□□ 0.85
NPIPA1Q9UND3 AC104564.3-201ENST00000582367 638 ntBASIC20.39■□□□□ 0.85
NPIPA1Q9UND3 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
NPIPA1Q9UND3 MIR6821-201ENST00000617625 74 ntBASIC20.39■□□□□ 0.85
NPIPA1Q9UND3 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
NPIPA1Q9UND3 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
NPIPA1Q9UND3 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
NPIPA1Q9UND3 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NPIPA1Q9UND3 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.39■□□□□ 0.85
NPIPA1Q9UND3 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.38■□□□□ 0.85
NPIPA1Q9UND3 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
NPIPA1Q9UND3 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NPIPA1Q9UND3 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NPIPA1Q9UND3 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NPIPA1Q9UND3 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.38■□□□□ 0.85
NPIPA1Q9UND3 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.38■□□□□ 0.85
NPIPA1Q9UND3 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NPIPA1Q9UND3 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.38■□□□□ 0.85
NPIPA1Q9UND3 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.38■□□□□ 0.85
NPIPA1Q9UND3 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.38■□□□□ 0.85
NPIPA1Q9UND3 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.38■□□□□ 0.85
NPIPA1Q9UND3 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NPIPA1Q9UND3 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.38■□□□□ 0.85
NPIPA1Q9UND3 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
NPIPA1Q9UND3 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NPIPA1Q9UND3 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NPIPA1Q9UND3 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NPIPA1Q9UND3 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.37■□□□□ 0.85
NPIPA1Q9UND3 AC097381.1-201ENST00000429019 1296 ntBASIC20.37■□□□□ 0.85
NPIPA1Q9UND3 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.37■□□□□ 0.85
NPIPA1Q9UND3 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NPIPA1Q9UND3 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
NPIPA1Q9UND3 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
NPIPA1Q9UND3 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.37■□□□□ 0.85
NPIPA1Q9UND3 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NPIPA1Q9UND3 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
NPIPA1Q9UND3 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NPIPA1Q9UND3 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
NPIPA1Q9UND3 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NPIPA1Q9UND3 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
NPIPA1Q9UND3 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NPIPA1Q9UND3 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NPIPA1Q9UND3 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NPIPA1Q9UND3 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NPIPA1Q9UND3 AC126544.1-201ENST00000580842 1059 ntBASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms