Protein–RNA interactions for Protein: Q9UKZ1

CNOT11, CCR4-NOT transcription complex subunit 11, humanhuman

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11Q9UKZ1 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
CNOT11Q9UKZ1 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CNOT11Q9UKZ1 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.3■■□□□ 1
CNOT11Q9UKZ1 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.3■■□□□ 1
CNOT11Q9UKZ1 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
CNOT11Q9UKZ1 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CNOT11Q9UKZ1 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.3■■□□□ 1
CNOT11Q9UKZ1 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.3■■□□□ 1
CNOT11Q9UKZ1 AC092028.1-203ENST00000608262 953 ntBASIC21.3■■□□□ 1
CNOT11Q9UKZ1 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CNOT11Q9UKZ1 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CNOT11Q9UKZ1 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.3■■□□□ 1
CNOT11Q9UKZ1 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CNOT11Q9UKZ1 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.29■■□□□ 1
CNOT11Q9UKZ1 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.29■■□□□ 1
CNOT11Q9UKZ1 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
CNOT11Q9UKZ1 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CNOT11Q9UKZ1 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.29■■□□□ 1
CNOT11Q9UKZ1 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CNOT11Q9UKZ1 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CNOT11Q9UKZ1 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
CNOT11Q9UKZ1 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CNOT11Q9UKZ1 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
CNOT11Q9UKZ1 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.29■■□□□ 1
CNOT11Q9UKZ1 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CNOT11Q9UKZ1 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CNOT11Q9UKZ1 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
CNOT11Q9UKZ1 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
CNOT11Q9UKZ1 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CNOT11Q9UKZ1 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
CNOT11Q9UKZ1 UNC93B8-201ENST00000511903 705 ntBASIC21.28■■□□□ 1
CNOT11Q9UKZ1 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.28■■□□□ 1
CNOT11Q9UKZ1 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.28■■□□□ 1
CNOT11Q9UKZ1 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
CNOT11Q9UKZ1 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CNOT11Q9UKZ1 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CNOT11Q9UKZ1 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CNOT11Q9UKZ1 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.27■■□□□ 1
CNOT11Q9UKZ1 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.27■■□□□ 1
CNOT11Q9UKZ1 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CNOT11Q9UKZ1 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CNOT11Q9UKZ1 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CNOT11Q9UKZ1 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CNOT11Q9UKZ1 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CNOT11Q9UKZ1 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CNOT11Q9UKZ1 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
CNOT11Q9UKZ1 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.26■□□□□ 0.99
CNOT11Q9UKZ1 AL356441.2-201ENST00000443009 864 ntBASIC21.26■□□□□ 0.99
CNOT11Q9UKZ1 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.26■□□□□ 0.99
CNOT11Q9UKZ1 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.26■□□□□ 0.99
CNOT11Q9UKZ1 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
CNOT11Q9UKZ1 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.26■□□□□ 0.99
CNOT11Q9UKZ1 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CNOT11Q9UKZ1 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.26■□□□□ 0.99
CNOT11Q9UKZ1 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.26■□□□□ 0.99
CNOT11Q9UKZ1 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CNOT11Q9UKZ1 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CNOT11Q9UKZ1 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
CNOT11Q9UKZ1 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.26■□□□□ 0.99
CNOT11Q9UKZ1 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
CNOT11Q9UKZ1 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CNOT11Q9UKZ1 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CNOT11Q9UKZ1 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.25■□□□□ 0.99
CNOT11Q9UKZ1 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.25■□□□□ 0.99
CNOT11Q9UKZ1 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.25■□□□□ 0.99
CNOT11Q9UKZ1 TSPY9P-201ENST00000440215 945 ntBASIC21.25■□□□□ 0.99
CNOT11Q9UKZ1 TSPY11P-201ENST00000442607 1045 ntBASIC21.25■□□□□ 0.99
CNOT11Q9UKZ1 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.25■□□□□ 0.99
CNOT11Q9UKZ1 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CNOT11Q9UKZ1 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CNOT11Q9UKZ1 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CNOT11Q9UKZ1 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CNOT11Q9UKZ1 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.24■□□□□ 0.99
CNOT11Q9UKZ1 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CNOT11Q9UKZ1 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
CNOT11Q9UKZ1 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.24■□□□□ 0.99
CNOT11Q9UKZ1 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
CNOT11Q9UKZ1 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CNOT11Q9UKZ1 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
CNOT11Q9UKZ1 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.24■□□□□ 0.99
CNOT11Q9UKZ1 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.24■□□□□ 0.99
CNOT11Q9UKZ1 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CNOT11Q9UKZ1 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.24■□□□□ 0.99
CNOT11Q9UKZ1 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.24■□□□□ 0.99
CNOT11Q9UKZ1 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.23■□□□□ 0.99
CNOT11Q9UKZ1 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CNOT11Q9UKZ1 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.23■□□□□ 0.99
CNOT11Q9UKZ1 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.23■□□□□ 0.99
CNOT11Q9UKZ1 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.23■□□□□ 0.99
CNOT11Q9UKZ1 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.23■□□□□ 0.99
CNOT11Q9UKZ1 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CNOT11Q9UKZ1 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CNOT11Q9UKZ1 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.23■□□□□ 0.99
CNOT11Q9UKZ1 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CNOT11Q9UKZ1 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CNOT11Q9UKZ1 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
CNOT11Q9UKZ1 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CNOT11Q9UKZ1 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.22■□□□□ 0.99
CNOT11Q9UKZ1 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
CNOT11Q9UKZ1 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms