Protein–RNA interactions for Protein: Q9P0I2

EMC3, ER membrane protein complex subunit 3, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EMC3Q9P0I2 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
EMC3Q9P0I2 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
EMC3Q9P0I2 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
EMC3Q9P0I2 AL136116.3-201ENST00000402907 1138 ntBASIC20.06■□□□□ 0.8
EMC3Q9P0I2 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.06■□□□□ 0.8
EMC3Q9P0I2 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.06■□□□□ 0.8
EMC3Q9P0I2 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.06■□□□□ 0.8
EMC3Q9P0I2 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.06■□□□□ 0.8
EMC3Q9P0I2 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
EMC3Q9P0I2 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
EMC3Q9P0I2 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
EMC3Q9P0I2 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
EMC3Q9P0I2 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
EMC3Q9P0I2 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
EMC3Q9P0I2 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
EMC3Q9P0I2 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
EMC3Q9P0I2 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
EMC3Q9P0I2 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
EMC3Q9P0I2 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
EMC3Q9P0I2 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.05■□□□□ 0.8
EMC3Q9P0I2 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.05■□□□□ 0.8
EMC3Q9P0I2 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
EMC3Q9P0I2 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
EMC3Q9P0I2 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.05■□□□□ 0.8
EMC3Q9P0I2 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
EMC3Q9P0I2 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
EMC3Q9P0I2 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.05■□□□□ 0.8
EMC3Q9P0I2 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
EMC3Q9P0I2 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
EMC3Q9P0I2 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.04■□□□□ 0.8
EMC3Q9P0I2 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
EMC3Q9P0I2 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
EMC3Q9P0I2 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
EMC3Q9P0I2 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.04■□□□□ 0.8
EMC3Q9P0I2 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.04■□□□□ 0.8
EMC3Q9P0I2 AC092171.4-201ENST00000609130 632 ntBASIC20.04■□□□□ 0.8
EMC3Q9P0I2 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.04■□□□□ 0.8
EMC3Q9P0I2 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
EMC3Q9P0I2 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
EMC3Q9P0I2 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.04■□□□□ 0.8
EMC3Q9P0I2 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.04■□□□□ 0.8
EMC3Q9P0I2 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
EMC3Q9P0I2 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
EMC3Q9P0I2 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
EMC3Q9P0I2 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
EMC3Q9P0I2 C17orf82-201ENST00000623772 1530 ntBASIC20.03■□□□□ 0.8
EMC3Q9P0I2 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
EMC3Q9P0I2 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
EMC3Q9P0I2 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
EMC3Q9P0I2 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
EMC3Q9P0I2 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
EMC3Q9P0I2 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
EMC3Q9P0I2 MIR4466-201ENST00000606121 54 ntBASIC20.03■□□□□ 0.8
EMC3Q9P0I2 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.03■□□□□ 0.8
EMC3Q9P0I2 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
EMC3Q9P0I2 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
EMC3Q9P0I2 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.03■□□□□ 0.8
EMC3Q9P0I2 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.02■□□□□ 0.8
EMC3Q9P0I2 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
EMC3Q9P0I2 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.02■□□□□ 0.8
EMC3Q9P0I2 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
EMC3Q9P0I2 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
EMC3Q9P0I2 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
EMC3Q9P0I2 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
EMC3Q9P0I2 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.02■□□□□ 0.8
EMC3Q9P0I2 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.02■□□□□ 0.8
EMC3Q9P0I2 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.02■□□□□ 0.8
EMC3Q9P0I2 AC241377.3-202ENST00000626088 1088 ntBASIC20.02■□□□□ 0.8
EMC3Q9P0I2 AC241585.3-202ENST00000628937 1088 ntBASIC20.02■□□□□ 0.8
EMC3Q9P0I2 AC245100.8-202ENST00000629247 1058 ntBASIC20.02■□□□□ 0.8
EMC3Q9P0I2 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
EMC3Q9P0I2 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.79
EMC3Q9P0I2 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
EMC3Q9P0I2 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
EMC3Q9P0I2 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
EMC3Q9P0I2 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
EMC3Q9P0I2 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
EMC3Q9P0I2 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
EMC3Q9P0I2 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
EMC3Q9P0I2 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
EMC3Q9P0I2 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
EMC3Q9P0I2 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
EMC3Q9P0I2 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
EMC3Q9P0I2 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20■□□□□ 0.79
EMC3Q9P0I2 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20■□□□□ 0.79
EMC3Q9P0I2 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
EMC3Q9P0I2 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
EMC3Q9P0I2 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20■□□□□ 0.79
EMC3Q9P0I2 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
EMC3Q9P0I2 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20■□□□□ 0.79
EMC3Q9P0I2 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
EMC3Q9P0I2 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
EMC3Q9P0I2 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
EMC3Q9P0I2 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
EMC3Q9P0I2 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
EMC3Q9P0I2 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
EMC3Q9P0I2 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.99■□□□□ 0.79
EMC3Q9P0I2 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
EMC3Q9P0I2 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
EMC3Q9P0I2 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms