Protein–RNA interactions for Protein: Q9NZU5

LMCD1, LIM and cysteine-rich domains protein 1, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1Q9NZU5 CD37-213ENST00000598095 1598 ntTSL 2 BASIC23.86■■□□□ 1.41
LMCD1Q9NZU5 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC23.86■■□□□ 1.41
LMCD1Q9NZU5 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC23.85■■□□□ 1.41
LMCD1Q9NZU5 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
LMCD1Q9NZU5 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
LMCD1Q9NZU5 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC23.85■■□□□ 1.41
LMCD1Q9NZU5 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
LMCD1Q9NZU5 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
LMCD1Q9NZU5 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
LMCD1Q9NZU5 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.85■■□□□ 1.41
LMCD1Q9NZU5 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC23.85■■□□□ 1.41
LMCD1Q9NZU5 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC23.85■■□□□ 1.41
LMCD1Q9NZU5 AL355802.2-201ENST00000402069 882 ntBASIC23.85■■□□□ 1.41
LMCD1Q9NZU5 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC23.85■■□□□ 1.41
LMCD1Q9NZU5 NCF1B-203ENST00000435988 1254 ntBASIC23.85■■□□□ 1.41
LMCD1Q9NZU5 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC23.85■■□□□ 1.41
LMCD1Q9NZU5 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC23.85■■□□□ 1.41
LMCD1Q9NZU5 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC23.85■■□□□ 1.41
LMCD1Q9NZU5 KRT18P61-201ENST00000585825 1298 ntBASIC23.85■■□□□ 1.41
LMCD1Q9NZU5 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
LMCD1Q9NZU5 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
LMCD1Q9NZU5 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
LMCD1Q9NZU5 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
LMCD1Q9NZU5 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
LMCD1Q9NZU5 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
LMCD1Q9NZU5 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC23.84■■□□□ 1.41
LMCD1Q9NZU5 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC23.84■■□□□ 1.41
LMCD1Q9NZU5 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC23.84■■□□□ 1.41
LMCD1Q9NZU5 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
LMCD1Q9NZU5 DBI-210ENST00000542275 757 ntTSL 5 BASIC23.84■■□□□ 1.41
LMCD1Q9NZU5 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
LMCD1Q9NZU5 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
LMCD1Q9NZU5 SHD-204ENST00000599689 1729 ntTSL 5 BASIC23.84■■□□□ 1.41
LMCD1Q9NZU5 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC23.83■■□□□ 1.41
LMCD1Q9NZU5 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
LMCD1Q9NZU5 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC23.83■■□□□ 1.41
LMCD1Q9NZU5 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC23.83■■□□□ 1.41
LMCD1Q9NZU5 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
LMCD1Q9NZU5 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC23.83■■□□□ 1.41
LMCD1Q9NZU5 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
LMCD1Q9NZU5 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC23.83■■□□□ 1.41
LMCD1Q9NZU5 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC23.83■■□□□ 1.41
LMCD1Q9NZU5 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
LMCD1Q9NZU5 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC23.83■■□□□ 1.41
LMCD1Q9NZU5 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
LMCD1Q9NZU5 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
LMCD1Q9NZU5 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
LMCD1Q9NZU5 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC23.82■■□□□ 1.4
LMCD1Q9NZU5 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
LMCD1Q9NZU5 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
LMCD1Q9NZU5 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC23.82■■□□□ 1.4
LMCD1Q9NZU5 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
LMCD1Q9NZU5 MFF-208ENST00000409616 1247 ntTSL 5 BASIC23.82■■□□□ 1.4
LMCD1Q9NZU5 CROCCP5-201ENST00000436658 830 ntBASIC23.82■■□□□ 1.4
LMCD1Q9NZU5 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC23.82■■□□□ 1.4
LMCD1Q9NZU5 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC23.82■■□□□ 1.4
LMCD1Q9NZU5 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
LMCD1Q9NZU5 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC23.82■■□□□ 1.4
LMCD1Q9NZU5 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
LMCD1Q9NZU5 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
LMCD1Q9NZU5 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
LMCD1Q9NZU5 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
LMCD1Q9NZU5 AC010525.1-201ENST00000585559 441 ntBASIC23.81■■□□□ 1.4
LMCD1Q9NZU5 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC23.81■■□□□ 1.4
LMCD1Q9NZU5 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
LMCD1Q9NZU5 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
LMCD1Q9NZU5 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
LMCD1Q9NZU5 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC23.8■■□□□ 1.4
LMCD1Q9NZU5 AC066615.1-201ENST00000640911 628 ntBASIC23.8■■□□□ 1.4
LMCD1Q9NZU5 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
LMCD1Q9NZU5 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC23.8■■□□□ 1.4
LMCD1Q9NZU5 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
LMCD1Q9NZU5 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC23.8■■□□□ 1.4
LMCD1Q9NZU5 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
LMCD1Q9NZU5 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC23.8■■□□□ 1.4
LMCD1Q9NZU5 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
LMCD1Q9NZU5 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
LMCD1Q9NZU5 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
LMCD1Q9NZU5 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
LMCD1Q9NZU5 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC23.79■■□□□ 1.4
LMCD1Q9NZU5 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC23.79■■□□□ 1.4
LMCD1Q9NZU5 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
LMCD1Q9NZU5 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
LMCD1Q9NZU5 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
LMCD1Q9NZU5 SLC6A10P-202ENST00000431994 2058 ntBASIC23.79■■□□□ 1.4
LMCD1Q9NZU5 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
LMCD1Q9NZU5 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.78■■□□□ 1.4
LMCD1Q9NZU5 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
LMCD1Q9NZU5 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
LMCD1Q9NZU5 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LMCD1Q9NZU5 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
LMCD1Q9NZU5 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC23.78■■□□□ 1.4
LMCD1Q9NZU5 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LMCD1Q9NZU5 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC23.78■■□□□ 1.4
LMCD1Q9NZU5 CD99P1-205ENST00000527459 561 ntBASIC23.78■■□□□ 1.4
LMCD1Q9NZU5 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC23.78■■□□□ 1.4
LMCD1Q9NZU5 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC23.78■■□□□ 1.4
LMCD1Q9NZU5 WWOX-218ENST00000627394 894 ntTSL 5 BASIC23.78■■□□□ 1.4
LMCD1Q9NZU5 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LMCD1Q9NZU5 AP004607.4-201ENST00000530158 1459 ntBASIC23.78■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms