Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VCX3AQ9NNX9 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VCX3AQ9NNX9 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
VCX3AQ9NNX9 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
VCX3AQ9NNX9 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.73■□□□□ 0.91
VCX3AQ9NNX9 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.73■□□□□ 0.91
VCX3AQ9NNX9 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VCX3AQ9NNX9 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.73■□□□□ 0.91
VCX3AQ9NNX9 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.73■□□□□ 0.91
VCX3AQ9NNX9 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
VCX3AQ9NNX9 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VCX3AQ9NNX9 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
VCX3AQ9NNX9 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VCX3AQ9NNX9 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VCX3AQ9NNX9 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.72■□□□□ 0.91
VCX3AQ9NNX9 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VCX3AQ9NNX9 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VCX3AQ9NNX9 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
VCX3AQ9NNX9 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VCX3AQ9NNX9 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
VCX3AQ9NNX9 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VCX3AQ9NNX9 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
VCX3AQ9NNX9 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
VCX3AQ9NNX9 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
VCX3AQ9NNX9 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
VCX3AQ9NNX9 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
VCX3AQ9NNX9 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
VCX3AQ9NNX9 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VCX3AQ9NNX9 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.71■□□□□ 0.91
VCX3AQ9NNX9 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
VCX3AQ9NNX9 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
VCX3AQ9NNX9 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
VCX3AQ9NNX9 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
VCX3AQ9NNX9 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.7■□□□□ 0.91
VCX3AQ9NNX9 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.91
VCX3AQ9NNX9 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VCX3AQ9NNX9 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.7■□□□□ 0.9
VCX3AQ9NNX9 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VCX3AQ9NNX9 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VCX3AQ9NNX9 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VCX3AQ9NNX9 AC008813.1-201ENST00000536597 885 ntBASIC20.7■□□□□ 0.9
VCX3AQ9NNX9 DUX4L28-201ENST00000623687 678 ntBASIC20.7■□□□□ 0.9
VCX3AQ9NNX9 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VCX3AQ9NNX9 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
VCX3AQ9NNX9 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VCX3AQ9NNX9 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
VCX3AQ9NNX9 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VCX3AQ9NNX9 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VCX3AQ9NNX9 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
VCX3AQ9NNX9 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
VCX3AQ9NNX9 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
VCX3AQ9NNX9 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
VCX3AQ9NNX9 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC20.69■□□□□ 0.9
VCX3AQ9NNX9 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VCX3AQ9NNX9 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.69■□□□□ 0.9
VCX3AQ9NNX9 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.69■□□□□ 0.9
VCX3AQ9NNX9 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
VCX3AQ9NNX9 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VCX3AQ9NNX9 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
VCX3AQ9NNX9 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VCX3AQ9NNX9 AC148477.6-201ENST00000623746 465 ntBASIC20.68■□□□□ 0.9
VCX3AQ9NNX9 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
VCX3AQ9NNX9 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VCX3AQ9NNX9 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
VCX3AQ9NNX9 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
VCX3AQ9NNX9 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
VCX3AQ9NNX9 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VCX3AQ9NNX9 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VCX3AQ9NNX9 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.68■□□□□ 0.9
VCX3AQ9NNX9 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
VCX3AQ9NNX9 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
VCX3AQ9NNX9 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VCX3AQ9NNX9 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
VCX3AQ9NNX9 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VCX3AQ9NNX9 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
VCX3AQ9NNX9 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
VCX3AQ9NNX9 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
VCX3AQ9NNX9 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VCX3AQ9NNX9 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
VCX3AQ9NNX9 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
VCX3AQ9NNX9 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
VCX3AQ9NNX9 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VCX3AQ9NNX9 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
VCX3AQ9NNX9 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.66■□□□□ 0.9
VCX3AQ9NNX9 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
VCX3AQ9NNX9 LINC01521-201ENST00000504184 1943 ntBASIC20.66■□□□□ 0.9
VCX3AQ9NNX9 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VCX3AQ9NNX9 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VCX3AQ9NNX9 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
VCX3AQ9NNX9 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VCX3AQ9NNX9 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
VCX3AQ9NNX9 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.65■□□□□ 0.9
VCX3AQ9NNX9 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.65■□□□□ 0.9
VCX3AQ9NNX9 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VCX3AQ9NNX9 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.65■□□□□ 0.9
VCX3AQ9NNX9 AC092053.2-201ENST00000640557 1818 ntBASIC20.65■□□□□ 0.9
VCX3AQ9NNX9 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
VCX3AQ9NNX9 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VCX3AQ9NNX9 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.65■□□□□ 0.9
VCX3AQ9NNX9 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms