Protein–RNA interactions for Protein: Q9H6Z4

RANBP3, Ran-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3Q9H6Z4 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RANBP3Q9H6Z4 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
RANBP3Q9H6Z4 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.21■□□□□ 0.67
RANBP3Q9H6Z4 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RANBP3Q9H6Z4 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RANBP3Q9H6Z4 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
RANBP3Q9H6Z4 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RANBP3Q9H6Z4 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
RANBP3Q9H6Z4 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
RANBP3Q9H6Z4 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.21■□□□□ 0.67
RANBP3Q9H6Z4 AC019171.1-201ENST00000601251 1056 ntBASIC19.21■□□□□ 0.67
RANBP3Q9H6Z4 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RANBP3Q9H6Z4 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RANBP3Q9H6Z4 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RANBP3Q9H6Z4 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RANBP3Q9H6Z4 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RANBP3Q9H6Z4 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.66
RANBP3Q9H6Z4 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
RANBP3Q9H6Z4 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RANBP3Q9H6Z4 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RANBP3Q9H6Z4 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.2■□□□□ 0.66
RANBP3Q9H6Z4 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RANBP3Q9H6Z4 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RANBP3Q9H6Z4 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RANBP3Q9H6Z4 MIR4508-201ENST00000584178 70 ntBASIC19.2■□□□□ 0.66
RANBP3Q9H6Z4 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RANBP3Q9H6Z4 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RANBP3Q9H6Z4 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RANBP3Q9H6Z4 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RANBP3Q9H6Z4 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RANBP3Q9H6Z4 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RANBP3Q9H6Z4 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
RANBP3Q9H6Z4 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
RANBP3Q9H6Z4 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RANBP3Q9H6Z4 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.2■□□□□ 0.66
RANBP3Q9H6Z4 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
RANBP3Q9H6Z4 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RANBP3Q9H6Z4 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RANBP3Q9H6Z4 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
RANBP3Q9H6Z4 IDNK-201ENST00000376417 511 ntTSL 5 BASIC19.19■□□□□ 0.66
RANBP3Q9H6Z4 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RANBP3Q9H6Z4 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC19.19■□□□□ 0.66
RANBP3Q9H6Z4 AC087393.1-201ENST00000582896 145 ntBASIC19.19■□□□□ 0.66
RANBP3Q9H6Z4 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RANBP3Q9H6Z4 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.19■□□□□ 0.66
RANBP3Q9H6Z4 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RANBP3Q9H6Z4 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RANBP3Q9H6Z4 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
RANBP3Q9H6Z4 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RANBP3Q9H6Z4 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
RANBP3Q9H6Z4 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.18■□□□□ 0.66
RANBP3Q9H6Z4 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.18■□□□□ 0.66
RANBP3Q9H6Z4 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RANBP3Q9H6Z4 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.18■□□□□ 0.66
RANBP3Q9H6Z4 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RANBP3Q9H6Z4 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RANBP3Q9H6Z4 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
RANBP3Q9H6Z4 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.18■□□□□ 0.66
RANBP3Q9H6Z4 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.17■□□□□ 0.66
RANBP3Q9H6Z4 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RANBP3Q9H6Z4 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
RANBP3Q9H6Z4 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RANBP3Q9H6Z4 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RANBP3Q9H6Z4 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RANBP3Q9H6Z4 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RANBP3Q9H6Z4 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.17■□□□□ 0.66
RANBP3Q9H6Z4 AL035685.1-201ENST00000636663 812 ntBASIC19.17■□□□□ 0.66
RANBP3Q9H6Z4 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
RANBP3Q9H6Z4 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
RANBP3Q9H6Z4 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RANBP3Q9H6Z4 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RANBP3Q9H6Z4 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RANBP3Q9H6Z4 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RANBP3Q9H6Z4 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
RANBP3Q9H6Z4 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
RANBP3Q9H6Z4 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RANBP3Q9H6Z4 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
RANBP3Q9H6Z4 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
RANBP3Q9H6Z4 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
RANBP3Q9H6Z4 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.16■□□□□ 0.66
RANBP3Q9H6Z4 RPS2P7-201ENST00000447334 885 ntBASIC19.16■□□□□ 0.66
RANBP3Q9H6Z4 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RANBP3Q9H6Z4 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RANBP3Q9H6Z4 AL451085.2-201ENST00000605085 799 ntBASIC19.16■□□□□ 0.66
RANBP3Q9H6Z4 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RANBP3Q9H6Z4 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
RANBP3Q9H6Z4 HLA-L-211ENST00000482052 1765 ntBASIC19.16■□□□□ 0.66
RANBP3Q9H6Z4 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RANBP3Q9H6Z4 KRT8P33-201ENST00000508125 1423 ntBASIC19.16■□□□□ 0.66
RANBP3Q9H6Z4 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RANBP3Q9H6Z4 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RANBP3Q9H6Z4 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
RANBP3Q9H6Z4 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RANBP3Q9H6Z4 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RANBP3Q9H6Z4 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RANBP3Q9H6Z4 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
RANBP3Q9H6Z4 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.15■□□□□ 0.66
RANBP3Q9H6Z4 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.15■□□□□ 0.66
RANBP3Q9H6Z4 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RANBP3Q9H6Z4 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms