Protein–RNA interactions for Protein: Q9H3M9

ATXN3L, Ataxin-3-like protein, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3LQ9H3M9 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
ATXN3LQ9H3M9 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
ATXN3LQ9H3M9 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
ATXN3LQ9H3M9 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
ATXN3LQ9H3M9 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
ATXN3LQ9H3M9 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
ATXN3LQ9H3M9 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
ATXN3LQ9H3M9 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
ATXN3LQ9H3M9 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23.34■■□□□ 1.33
ATXN3LQ9H3M9 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
ATXN3LQ9H3M9 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
ATXN3LQ9H3M9 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.34■■□□□ 1.33
ATXN3LQ9H3M9 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC23.33■■□□□ 1.33
ATXN3LQ9H3M9 AC144652.1-201ENST00000609974 1624 ntBASIC23.33■■□□□ 1.33
ATXN3LQ9H3M9 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
ATXN3LQ9H3M9 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC23.33■■□□□ 1.33
ATXN3LQ9H3M9 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
ATXN3LQ9H3M9 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC23.33■■□□□ 1.33
ATXN3LQ9H3M9 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
ATXN3LQ9H3M9 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
ATXN3LQ9H3M9 NME4-202ENST00000382940 766 ntTSL 3 BASIC23.33■■□□□ 1.33
ATXN3LQ9H3M9 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC23.33■■□□□ 1.33
ATXN3LQ9H3M9 NME4-211ENST00000620944 1193 ntTSL 2 BASIC23.33■■□□□ 1.33
ATXN3LQ9H3M9 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
ATXN3LQ9H3M9 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
ATXN3LQ9H3M9 LINC01529-204ENST00000636474 1715 ntBASIC23.33■■□□□ 1.32
ATXN3LQ9H3M9 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
ATXN3LQ9H3M9 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
ATXN3LQ9H3M9 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
ATXN3LQ9H3M9 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
ATXN3LQ9H3M9 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
ATXN3LQ9H3M9 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC23.32■■□□□ 1.32
ATXN3LQ9H3M9 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
ATXN3LQ9H3M9 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
ATXN3LQ9H3M9 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
ATXN3LQ9H3M9 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
ATXN3LQ9H3M9 IGHV3-19-201ENST00000521488 291 ntBASIC23.32■■□□□ 1.32
ATXN3LQ9H3M9 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC23.32■■□□□ 1.32
ATXN3LQ9H3M9 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
ATXN3LQ9H3M9 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC23.32■■□□□ 1.32
ATXN3LQ9H3M9 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
ATXN3LQ9H3M9 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC23.32■■□□□ 1.32
ATXN3LQ9H3M9 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
ATXN3LQ9H3M9 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ATXN3LQ9H3M9 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ATXN3LQ9H3M9 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
ATXN3LQ9H3M9 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC23.31■■□□□ 1.32
ATXN3LQ9H3M9 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
ATXN3LQ9H3M9 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.31■■□□□ 1.32
ATXN3LQ9H3M9 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC23.31■■□□□ 1.32
ATXN3LQ9H3M9 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC23.31■■□□□ 1.32
ATXN3LQ9H3M9 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC23.31■■□□□ 1.32
ATXN3LQ9H3M9 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC23.31■■□□□ 1.32
ATXN3LQ9H3M9 AC010525.1-201ENST00000585559 441 ntBASIC23.31■■□□□ 1.32
ATXN3LQ9H3M9 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
ATXN3LQ9H3M9 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
ATXN3LQ9H3M9 SHD-204ENST00000599689 1729 ntTSL 5 BASIC23.3■■□□□ 1.32
ATXN3LQ9H3M9 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
ATXN3LQ9H3M9 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ATXN3LQ9H3M9 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
ATXN3LQ9H3M9 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ATXN3LQ9H3M9 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ATXN3LQ9H3M9 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ATXN3LQ9H3M9 GLI3-203ENST00000437480 451 ntTSL 2 BASIC23.3■■□□□ 1.32
ATXN3LQ9H3M9 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC23.3■■□□□ 1.32
ATXN3LQ9H3M9 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC23.3■■□□□ 1.32
ATXN3LQ9H3M9 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
ATXN3LQ9H3M9 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ATXN3LQ9H3M9 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
ATXN3LQ9H3M9 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
ATXN3LQ9H3M9 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
ATXN3LQ9H3M9 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC23.29■■□□□ 1.32
ATXN3LQ9H3M9 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC23.29■■□□□ 1.32
ATXN3LQ9H3M9 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
ATXN3LQ9H3M9 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
ATXN3LQ9H3M9 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
ATXN3LQ9H3M9 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
ATXN3LQ9H3M9 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC23.29■■□□□ 1.32
ATXN3LQ9H3M9 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
ATXN3LQ9H3M9 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
ATXN3LQ9H3M9 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
ATXN3LQ9H3M9 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC23.28■■□□□ 1.32
ATXN3LQ9H3M9 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
ATXN3LQ9H3M9 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ATXN3LQ9H3M9 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
ATXN3LQ9H3M9 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ATXN3LQ9H3M9 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ATXN3LQ9H3M9 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ATXN3LQ9H3M9 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC23.28■■□□□ 1.32
ATXN3LQ9H3M9 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
ATXN3LQ9H3M9 OR2I1P-207ENST00000453522 948 ntBASIC23.28■■□□□ 1.32
ATXN3LQ9H3M9 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC23.28■■□□□ 1.32
ATXN3LQ9H3M9 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC23.28■■□□□ 1.32
ATXN3LQ9H3M9 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ATXN3LQ9H3M9 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
ATXN3LQ9H3M9 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
ATXN3LQ9H3M9 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC23.27■■□□□ 1.32
ATXN3LQ9H3M9 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
ATXN3LQ9H3M9 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
ATXN3LQ9H3M9 MIR572-201ENST00000384983 95 ntBASIC23.27■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms