Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.81■□□□□ 0.6
FOXC2Q99958 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FOXC2Q99958 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
FOXC2Q99958 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FOXC2Q99958 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
FOXC2Q99958 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FOXC2Q99958 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FOXC2Q99958 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.81■□□□□ 0.6
FOXC2Q99958 MIR663A-201ENST00000385250 93 ntBASIC18.81■□□□□ 0.6
FOXC2Q99958 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
FOXC2Q99958 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.81■□□□□ 0.6
FOXC2Q99958 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.81■□□□□ 0.6
FOXC2Q99958 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FOXC2Q99958 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FOXC2Q99958 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.81■□□□□ 0.6
FOXC2Q99958 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
FOXC2Q99958 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
FOXC2Q99958 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
FOXC2Q99958 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC18.8■□□□□ 0.6
FOXC2Q99958 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
FOXC2Q99958 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
FOXC2Q99958 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC18.8■□□□□ 0.6
FOXC2Q99958 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
FOXC2Q99958 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
FOXC2Q99958 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.8■□□□□ 0.6
FOXC2Q99958 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
FOXC2Q99958 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.8■□□□□ 0.6
FOXC2Q99958 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.8■□□□□ 0.6
FOXC2Q99958 TPRG1LP1-201ENST00000598702 760 ntBASIC18.8■□□□□ 0.6
FOXC2Q99958 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
FOXC2Q99958 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
FOXC2Q99958 AC004854.2-201ENST00000608450 1441 ntBASIC18.8■□□□□ 0.6
FOXC2Q99958 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FOXC2Q99958 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
FOXC2Q99958 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
FOXC2Q99958 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.79■□□□□ 0.6
FOXC2Q99958 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
FOXC2Q99958 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
FOXC2Q99958 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FOXC2Q99958 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
FOXC2Q99958 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
FOXC2Q99958 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.79■□□□□ 0.6
FOXC2Q99958 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
FOXC2Q99958 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.79■□□□□ 0.6
FOXC2Q99958 AC011767.1-201ENST00000617410 1153 ntBASIC18.79■□□□□ 0.6
FOXC2Q99958 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
FOXC2Q99958 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
FOXC2Q99958 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FOXC2Q99958 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
FOXC2Q99958 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.78■□□□□ 0.6
FOXC2Q99958 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
FOXC2Q99958 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
FOXC2Q99958 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC18.78■□□□□ 0.6
FOXC2Q99958 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
FOXC2Q99958 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
FOXC2Q99958 KRT18P6-201ENST00000555540 1265 ntBASIC18.78■□□□□ 0.6
FOXC2Q99958 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.78■□□□□ 0.6
FOXC2Q99958 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18.78■□□□□ 0.6
FOXC2Q99958 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
FOXC2Q99958 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
FOXC2Q99958 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
FOXC2Q99958 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
FOXC2Q99958 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
FOXC2Q99958 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.77■□□□□ 0.6
FOXC2Q99958 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.77■□□□□ 0.6
FOXC2Q99958 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC18.77■□□□□ 0.6
FOXC2Q99958 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
FOXC2Q99958 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
FOXC2Q99958 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC18.76■□□□□ 0.59
FOXC2Q99958 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
FOXC2Q99958 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.76■□□□□ 0.59
FOXC2Q99958 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.76■□□□□ 0.59
FOXC2Q99958 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.76■□□□□ 0.59
FOXC2Q99958 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
FOXC2Q99958 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.76■□□□□ 0.59
FOXC2Q99958 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
FOXC2Q99958 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
FOXC2Q99958 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
FOXC2Q99958 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
FOXC2Q99958 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
FOXC2Q99958 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
FOXC2Q99958 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
FOXC2Q99958 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
FOXC2Q99958 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
FOXC2Q99958 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
FOXC2Q99958 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
FOXC2Q99958 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
FOXC2Q99958 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.75■□□□□ 0.59
FOXC2Q99958 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
FOXC2Q99958 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
FOXC2Q99958 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
FOXC2Q99958 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
FOXC2Q99958 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
FOXC2Q99958 ALDH1A3-203ENST00000557963 1670 ntBASIC18.74■□□□□ 0.59
FOXC2Q99958 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
FOXC2Q99958 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
FOXC2Q99958 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
FOXC2Q99958 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.74■□□□□ 0.59
FOXC2Q99958 AL121832.2-201ENST00000610979 668 ntBASIC18.74■□□□□ 0.59
FOXC2Q99958 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms