Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
TM9SF2Q99805 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TM9SF2Q99805 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TM9SF2Q99805 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
TM9SF2Q99805 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TM9SF2Q99805 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TM9SF2Q99805 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TM9SF2Q99805 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.46■□□□□ 0.87
TM9SF2Q99805 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
TM9SF2Q99805 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.46■□□□□ 0.87
TM9SF2Q99805 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TM9SF2Q99805 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
TM9SF2Q99805 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
TM9SF2Q99805 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TM9SF2Q99805 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TM9SF2Q99805 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
TM9SF2Q99805 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TM9SF2Q99805 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
TM9SF2Q99805 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TM9SF2Q99805 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
TM9SF2Q99805 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TM9SF2Q99805 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TM9SF2Q99805 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
TM9SF2Q99805 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TM9SF2Q99805 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TM9SF2Q99805 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TM9SF2Q99805 AL161729.1-201ENST00000604104 1402 ntBASIC20.44■□□□□ 0.86
TM9SF2Q99805 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TM9SF2Q99805 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TM9SF2Q99805 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TM9SF2Q99805 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TM9SF2Q99805 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TM9SF2Q99805 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.44■□□□□ 0.86
TM9SF2Q99805 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TM9SF2Q99805 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TM9SF2Q99805 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TM9SF2Q99805 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
TM9SF2Q99805 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TM9SF2Q99805 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TM9SF2Q99805 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TM9SF2Q99805 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TM9SF2Q99805 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TM9SF2Q99805 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
TM9SF2Q99805 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.43■□□□□ 0.86
TM9SF2Q99805 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TM9SF2Q99805 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.43■□□□□ 0.86
TM9SF2Q99805 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TM9SF2Q99805 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TM9SF2Q99805 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TM9SF2Q99805 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.42■□□□□ 0.86
TM9SF2Q99805 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.42■□□□□ 0.86
TM9SF2Q99805 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TM9SF2Q99805 SRD5A1P1-201ENST00000442297 786 ntBASIC20.42■□□□□ 0.86
TM9SF2Q99805 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.42■□□□□ 0.86
TM9SF2Q99805 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TM9SF2Q99805 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TM9SF2Q99805 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TM9SF2Q99805 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
TM9SF2Q99805 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TM9SF2Q99805 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
TM9SF2Q99805 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TM9SF2Q99805 C1orf229-201ENST00000623686 2258 ntBASIC20.41■□□□□ 0.86
TM9SF2Q99805 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TM9SF2Q99805 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TM9SF2Q99805 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.41■□□□□ 0.86
TM9SF2Q99805 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TM9SF2Q99805 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TM9SF2Q99805 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
TM9SF2Q99805 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.4■□□□□ 0.86
TM9SF2Q99805 AC096631.2-201ENST00000436136 790 ntBASIC20.4■□□□□ 0.86
TM9SF2Q99805 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.4■□□□□ 0.86
TM9SF2Q99805 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
TM9SF2Q99805 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
TM9SF2Q99805 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.4■□□□□ 0.86
TM9SF2Q99805 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.4■□□□□ 0.86
TM9SF2Q99805 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TM9SF2Q99805 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
TM9SF2Q99805 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
TM9SF2Q99805 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TM9SF2Q99805 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
TM9SF2Q99805 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
TM9SF2Q99805 ANOS2P-203ENST00000472227 1816 ntBASIC20.39■□□□□ 0.86
TM9SF2Q99805 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
TM9SF2Q99805 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.39■□□□□ 0.85
TM9SF2Q99805 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TM9SF2Q99805 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TM9SF2Q99805 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TM9SF2Q99805 MIR638-201ENST00000385237 100 ntBASIC20.39■□□□□ 0.85
TM9SF2Q99805 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.39■□□□□ 0.85
TM9SF2Q99805 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TM9SF2Q99805 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.39■□□□□ 0.85
TM9SF2Q99805 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.39■□□□□ 0.85
TM9SF2Q99805 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TM9SF2Q99805 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
TM9SF2Q99805 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TM9SF2Q99805 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TM9SF2Q99805 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.39■□□□□ 0.85
TM9SF2Q99805 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
TM9SF2Q99805 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.38■□□□□ 0.85
TM9SF2Q99805 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms